Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4270 |
Symbol | glyA |
ID | 3369810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5094122 |
End bp | 5095375 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654630 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_237338 |
Protein GI | 66047497 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGCC GTGATTTGAC TATCGCCAAG TACGACGCCG ATCTGTTTGC CGCCATGGAG CAAGAAGCTC TGCGTCAGGA AGAACACATC GAGCTGATTG CCTCGGAAAA CTACACCAGT CCGGCCGTCA TGGAAGCTCA GGGCTCGGCC CTGACCAACA AGTACGCCGA AGGCTATCCA GGCAAGCGCT ACTACGGTGG TTGCGAGTAC GTCGACATTA TCGAGCAACT GGCCATCGAC CGCGCCAAGG AACTGTTCGG CGCTGATTAC GCCAACGTCC AGCCACACGC CGGTTCGCAA GCCAACTCGG CGGTCTACCT GGCCCTGCTG CAAGGCGGCG ACACCATTCT GGGCATGAGC CTGGCTCACG GTGGTCACCT GACCCACGGC GCCAGCGTTT CGTCCTCGGG CAAGCTGTAC AACGCCGTTC AGTACGGCAT CGATGCCAAC GGCATGATCG ACTACGACGA AGTCGAGCGC CTGGCCGTCG AGCACAAGCC AAAAATGATC GTCGCCGGTT TCTCTGCCTA CTCGCAGATC CTCGACTTCC CGCGCTTCCG CGCCATCGCT GACAAGGTCG GTGCCTACCT GTTCGTCGAC ATGGCGCACG TCGCCGGTCT GGTCGCCGCA GGCGTCTACC CGAACCCGGT GCCATTCGCC GACGTCGTGA CCACCACCAC GCACAAGACC CTGCGCGGTC CGCGTGGCGG CCTGATCCTG GCGCGCGCCA ACGCCGAGAT CGAGAAGAAG CTGAACTCGG CGGTGTTCCC TGGCTCCCAG GGCGGCCCGC TGGAGCACGT CATCGCGGCC AAGGCCGTGT GCTTCAAGGA AGCGCTGCAG CCTGAGTTCA AGACCTACCA GCAGCAAGTG GTGAAGAACG CCAAGGCCAT GGCCGGCGTG TTCATCGAGC GTGGCTTCGA CGTCGTTTCC GGCGGTACCG AGAACCACCT GTTCCTGCTG TCGCTGATCA AACAGGACAT CTCCGGTAAA GACGCTGACG CCGCTCTGGG TCGCGCCTTC ATCACCGTCA ACAAGAACTC CGTACCGAAC GACCCACGCT CCCCGTTCGT CACCTCCGGC CTGCGCTTCG GCACCCCGGC AGTGACCACT CGCGGCTTCA AGGAAGCTGA GTGCAAGGAA CTGGCCGGCT GGATCTGCGA CATCCTGGCT GACCTGAACA ACGAAGCCGT GATCGACGCG GTTCGTGAGA AGGTCAAGGC CATCTGCGCC AAGCTGCCGG TTTACGGCGC TTGA
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Protein sequence | MFSRDLTIAK YDADLFAAME QEALRQEEHI ELIASENYTS PAVMEAQGSA LTNKYAEGYP GKRYYGGCEY VDIIEQLAID RAKELFGADY ANVQPHAGSQ ANSAVYLALL QGGDTILGMS LAHGGHLTHG ASVSSSGKLY NAVQYGIDAN GMIDYDEVER LAVEHKPKMI VAGFSAYSQI LDFPRFRAIA DKVGAYLFVD MAHVAGLVAA GVYPNPVPFA DVVTTTTHKT LRGPRGGLIL ARANAEIEKK LNSAVFPGSQ GGPLEHVIAA KAVCFKEALQ PEFKTYQQQV VKNAKAMAGV FIERGFDVVS GGTENHLFLL SLIKQDISGK DADAALGRAF ITVNKNSVPN DPRSPFVTSG LRFGTPAVTT RGFKEAECKE LAGWICDILA DLNNEAVIDA VREKVKAICA KLPVYGA
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