Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4239 |
Symbol | |
ID | 3369779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5051620 |
End bp | 5052630 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637654599 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_237307 |
Protein GI | 66047466 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0349667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAGTT TTATCGCCCG CCGAGTGGGG TTGCTGATAC CCACTTTCTT CGGCATCACC TTATTGACCT TCGCCCTGAT TCGTCTGATT CCGGGCGATC CGGTCGAAGT CATGATGGGT GAGCGCCGTG TCGATCCGGA AATGCACGCT CAGGCCATGG AGCGTCTGGG TCTGAACAAA CCCCTCTACG CCCAGTACAT CGATTACATC GGCAAGCTCG CCCAGGGCGA CCTCGGTGAA TCGCTGCGTA CGCGCACCAG TGTCTGGTCC GAATTCACTT CGCTGTTCCC GGCAACCCTG GAGTTGTCGC TGGCGGCGCT GATTTTCGCG GGTATTCTCG GCCTGCTGGC CGGGGTGATC GCCGCACTCA AGCGAGGGTC CCTGTTCGAC CATGGGGTCA TGGGGATTTC CCTCGCCGGT TATTCCATGC CGATCTTCTG GTGGGGCCTG ATCCTCATCA TGTTCTTCTC GGTAACGCTG GGCTGGACCC CGGTTTCCGG GCGCATCGAC CTGCTGTACG ACATTCCGCC GGTCACCGGC TTCATGCTGA TCGACACGCT GCTCAGTGAC GAACAGGGTT CGTTCCTCGA TGCCCTGCAC CACATGATTC TGCCGGCCAT CGTACTGGGC ACCATCCCGC TCGCGGTGAT CGCCCGGATG ACTCGCTCGT CGATGCTCGA AGTGCTGCGT GAAGACTACG TGCGTACCGC CAGAGCCAAA GGCCTGTCGC CTGCCCGTGT GGTATTCGTT CATGGCCTGC GCAATGCGCT GATTCCGGTA CTGACCGTGT TCGGTCTGCA AATCGGTACC TTGCTGGCCG GTGCGGTACT GACCGAAACG ATCTTCTCCT GGCCGGGTAT CGGCAAGTGG TTGATCGAAG CCATTGGCGC CCGGGACTAC CCGGTCGTGC AAAACGGCAT TCTGCTGATC GCCTGTCTGG TGATCCTGGT CAATTTCGTG GTGGATATCC TCTACGGCTT TGCCAACCCA CGCATTCGTC ACCAGCGCTG A
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Protein sequence | MFSFIARRVG LLIPTFFGIT LLTFALIRLI PGDPVEVMMG ERRVDPEMHA QAMERLGLNK PLYAQYIDYI GKLAQGDLGE SLRTRTSVWS EFTSLFPATL ELSLAALIFA GILGLLAGVI AALKRGSLFD HGVMGISLAG YSMPIFWWGL ILIMFFSVTL GWTPVSGRID LLYDIPPVTG FMLIDTLLSD EQGSFLDALH HMILPAIVLG TIPLAVIARM TRSSMLEVLR EDYVRTARAK GLSPARVVFV HGLRNALIPV LTVFGLQIGT LLAGAVLTET IFSWPGIGKW LIEAIGARDY PVVQNGILLI ACLVILVNFV VDILYGFANP RIRHQR
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