| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4238 |
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| Symbol | |
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| ID | 3369778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5049950 |
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| End bp | 5051545 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637654598 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_237306 |
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| Protein GI | 66047465 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0301487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACTGC TATCGCTCCG CGCGTCGATT GCCATTGCGC TGCTTAGCGC CGCCGCAACC
GTTTCGGCCA AACCGCTGGT GGTCTGCACC GAAGCGAGCC CTGAAGGTTT CGATATCGTG
CAGTACACGA CCGCCGTCAC GGCAGATGCC TCGGCCGAAA CCATTCTTGA ACGTCTGGTA
GCGTTCACCC CAAGCACCAC TGATACCGTA CCGGGCCTGG CTGAAAGCTG GGACATCAGC
CCCGACGGTC TGACGTACAC TTTCAAACTG CGAAAGGGCG TCAAATTCCA GACCACCGAC
TACTTCAAGC CCACCCGCGA AATGAATGCC GATGACGTGG TCTGGAGCTT CAAGCGCCAG
TTGGACCCCA AGCATCCGTG GCACGCACTT TCGCTGGTCG GCTACCCCTA TTTTGAAAGC
ATGGGCTTCC AGAACTTGCT CAAGGACGTC GAAAAAGTTG ACGACTCCAC CGTCAAGTTC
ACCCTTGCGC ATCCCGAGTC GCCATTCCTG CGTGATCTGG CGATGCCGTT CACCTCGATC
TATTCCGCCG AATACGCCGA CCAGTTGCTC AAGAGCAACA AGACCGCCGA ACTCAACAGC
AAACCGATTG GCACCGGCCC GTTCATCCTG ACTCGCTATG CCAAGGATGC CCAAGTCCGC
TATAAAGCCA ACCCGAATTA CTGGAAAGGC AAAGTGCCGA GTGAAGCACT GATCTTTGCC
ATCACTCTGG ACAACAACAC ACGCCTGCAA AAGCTCAAGG CGAATGAATG TCAGGTTGCG
CTTTACCCAA AACCTGACGA TATTGCCAAC ATCAAGGCTG ACCCCAATCT CAAGATCGAC
GAGATGGAGT CCATGATGAC CAGCTACCTG GCCATGAACA CCTCGCACAA ATACCTGAGC
GATGTGCGCG TGCGGCAGGC GATCAATCTG GCCTTCGACA AGAAATCGTA CATCAGGGCA
CTGTTTGGCG AAGGCAAGGC CACTGAGGGT GTAGGCCCGT ATCCACCGAC CATGATGGGT
TACGACACCG CTAGCAAGAG CCCCGCATAC GATCCTGACA AGGCCCGTGC GCTGCTCAAG
GAAGCCGGCG TACCTGAGGG TCAGGTATTC ACCCTGTTTG CTCGAAATGG CGGCGCGGTG
ACCAACCCGA ACCCGATGGT AGGCGCACAG ATGCTTCAGT CGGACATGGC CAAGGTCGGG
ATCAAGATAG ACATTCGCAT CATGGAATGG GGCGAAATGC TCAAGCGCGC CAAAAATGGC
GAACACGACA TGGTTTTTGC CGGATGGGCT GGCGACAATG GCGACCCGGA TAACTTCCTC
ACGCCCAACC TGAGCTGTGA CGCGGCCAAA AATGGCGAGA ACTATGCCCG CTGGTGCAAC
AACGCGTTCG AGGACGCAAT CACTCAAGCA CGAAAAATAA CCGAACCGGC GGAACGTGCC
GCCCTCTATA AGCAGGCTCA ACAAGTGTTC AATCAAGAAC AGCCCTGGAT CAGCCTGGCT
TACCCGAAAC TTTTCGTTGC AATGCGCAAA GATGTCGAAG GCTTTAAAAT AAGCCCTTTG
ACCAATAACA ACTTCGCCAC TACCCAGGTG AAGTAG
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| Protein sequence | MKLLSLRASI AIALLSAAAT VSAKPLVVCT EASPEGFDIV QYTTAVTADA SAETILERLV
AFTPSTTDTV PGLAESWDIS PDGLTYTFKL RKGVKFQTTD YFKPTREMNA DDVVWSFKRQ
LDPKHPWHAL SLVGYPYFES MGFQNLLKDV EKVDDSTVKF TLAHPESPFL RDLAMPFTSI
YSAEYADQLL KSNKTAELNS KPIGTGPFIL TRYAKDAQVR YKANPNYWKG KVPSEALIFA
ITLDNNTRLQ KLKANECQVA LYPKPDDIAN IKADPNLKID EMESMMTSYL AMNTSHKYLS
DVRVRQAINL AFDKKSYIRA LFGEGKATEG VGPYPPTMMG YDTASKSPAY DPDKARALLK
EAGVPEGQVF TLFARNGGAV TNPNPMVGAQ MLQSDMAKVG IKIDIRIMEW GEMLKRAKNG
EHDMVFAGWA GDNGDPDNFL TPNLSCDAAK NGENYARWCN NAFEDAITQA RKITEPAERA
ALYKQAQQVF NQEQPWISLA YPKLFVAMRK DVEGFKISPL TNNNFATTQV K
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