Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4229 |
Symbol | |
ID | 3369769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5036511 |
End bp | 5038229 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637654589 |
Product | ABC transporter:ABC transporter, N-terminal |
Protein accession | YP_237297 |
Protein GI | 66047456 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGCA ATGCTGAATA TTCTGCCGTC AACGATACTG TGCAAGGAGC ATTTTTACCC CGCGTCTGGA AGCTGATAAC GCCATATTGG CGCAGTGAGG AAAAGACCAC TGCCTGGCTG CTGCTGGTCT CGGTGATCGC ACTGTCGCTG TTCAGCGTGC AGGTCTCGGT GTTCTTCAAC AGCTGGTACC GAGACTTCTA CAACGCGCTG CAGAACAAGG ATCTGGCTGC GTTCACCCAC CTGATCCTGT ACTTCAGCGG CATCGCCGCG ATCGCCATTC TGGCTGCGGT CTATCGCCTG TACCTGACCC AGTTGCTGAC CATCCGCTGG CGTCGCTGGC TGACGGAGCA ACACTTCGCG CGCTGGCTCG CCGACAAGAA TTACTACCAG CTGGAGCAGG GCGGTTACAC CGATAACCCT GACCAGCGCC TGTCCGAAGA CCTCAACGAG TTCACCACCA GCACCCTCAG CCTGGGGCTG GGGCTGATGA GCTCGGTGGT CAGCCTGGTG TCGTTTTCGG TGATTCTCTG GGGCGTGTCG GGCAGTATCG AGCTGTTCGG CGTGACCATT CCCGGCTATA TGTTCTGGGC GGCCTTGCTC TATGCGCTGG TGGGCAGCCT GCTGACCCAC TGGATCGGCA AGCGGCTGAT CCCGTTGAAC AACCAGCAGG AGCGATTCGA GGCGGACCTG CGTTTTGCCC TGGTGCGTGT GCGCGAGAAC GCTGAAAGCA TTGCCTTGTC CGAAGGCGAG CGCAACGAAA ACCAGCGCCT GAGCGCACGC TTCACGATGA TCTGGAATAA CTTCCGGGCC TCGATGAAGG TCCAGAAGCG GCTGACGTTC TTCACCTCGG GCTATTCGCA GATTGCGCTG ATCTTTCCCT TCATTGTGGC CGCGCCACGC TATTTCGCCG GCAAGATCGA GCTGGGTGAT CTGATGCAGA TCAACTCGGC ATTCGGCAAT GTGCAGGAGA ACTTCAGCTG GTTCATCAGC GCCTATGGCA CGCTGGCGTC ATGGCGCGCC ACCAGCGACC GTCTGCTGAG CTTCCGCCAG GCCATGACTG ACAATGAAGG TCGGCAGCCG GCCATCGAAA GAATTCACGG CAACGACACG CTGGACCTGC GCAATCTGGG CTTGAGCATT GCCGGCGGTC GTCAGTTGCT GAGCGACGCC AGTCTGCAGG TCGGTGCGGG AGAGCGGGTC ATGCTCAGCG GTCGCTCGGG CAGTGGCAAA AGCTCGTTGC TGAGGGCGCT GGGCGGTCTC TGGCCTGAGG GTTCGGGGCA GATTCGCTTG CCCACCGGCA CGGCGCTGTT CCTGCCGCAA CGGCCTTACC TGCCCATCGG CACCTTGCGT GAGGCGATGA GTTATCCACA GCCTGTCGAG CATTACCCGG CACAGCGCTT TGCCGAGGTA CTGAATCAGT GCCGTCTGGA GCATCTGATA CCGCGCCTGG ACGAAAGCAA CCACTGGCAG CGTTTTCTCT CACCGGGCGA GCAGCAGCGG GTGGCGTTCG CGCGTGCCCT GCTGGTCGCG CCGAACTGGC TGTATGTGGA TGAGGCCACC TCGGCCATGG ACGAAGATGA CGAGACGGCG ATGCACTGCG CCATCATCGA CGGACTGCCC GGCCTGACGC TGATCAGCGT CGGGCACCGC AGCAGCCTGA AACGCTTCCA TGACCGGCAT GTGCGCGTCG AGAGCGGCAA ATTGATCGAG CAAGCGTGA
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Protein sequence | MNRNAEYSAV NDTVQGAFLP RVWKLITPYW RSEEKTTAWL LLVSVIALSL FSVQVSVFFN SWYRDFYNAL QNKDLAAFTH LILYFSGIAA IAILAAVYRL YLTQLLTIRW RRWLTEQHFA RWLADKNYYQ LEQGGYTDNP DQRLSEDLNE FTTSTLSLGL GLMSSVVSLV SFSVILWGVS GSIELFGVTI PGYMFWAALL YALVGSLLTH WIGKRLIPLN NQQERFEADL RFALVRVREN AESIALSEGE RNENQRLSAR FTMIWNNFRA SMKVQKRLTF FTSGYSQIAL IFPFIVAAPR YFAGKIELGD LMQINSAFGN VQENFSWFIS AYGTLASWRA TSDRLLSFRQ AMTDNEGRQP AIERIHGNDT LDLRNLGLSI AGGRQLLSDA SLQVGAGERV MLSGRSGSGK SSLLRALGGL WPEGSGQIRL PTGTALFLPQ RPYLPIGTLR EAMSYPQPVE HYPAQRFAEV LNQCRLEHLI PRLDESNHWQ RFLSPGEQQR VAFARALLVA PNWLYVDEAT SAMDEDDETA MHCAIIDGLP GLTLISVGHR SSLKRFHDRH VRVESGKLIE QA
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