| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4227 |
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| Symbol | |
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| ID | 3369767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5034437 |
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| End bp | 5035348 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637654587 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_237295 |
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| Protein GI | 66047454 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.881982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAC AAGAACTGAA GTCCATCCTC TCTTCCGGTC TGCTGTCTTT CCCGGTTACC
GATTTCAATG CCCAGGGCGA TTTTCATCGC GCTGGCTACA TCAAACGCCT CGAGTGGCTG
GCTCCGTATG GCGCAAGCGC TCTGTTCGCC GCCGGCGGCA CGGGTGAGTT TTTCTCCCTG
GCTGCCAGCG AATATTCCGA AATCATCAAG ACTGCCGTCG ACACTTGCGC CACCAGCGTG
CCAATCCTCG CCGGTGTAGG CGGTGCGACC CGTCAGGCCA TCGAGTACGC TCAGGAAGCC
GAGCGTCTGG GCGCCAAGGG CTTGCTGCTG CTGCCGCACT ACCTGACCGA AGCCAGCCAG
GACGGTGTTG CCGCTCACGT CGAAGCCGTG TGCAAATCGG TGAAGATCGG TGTGGTGGTC
TACAACCGTA ACGTCTGCCG CCTGACGCCA ACCCTGCTGG AACAACTGGC CGAGCGTTGC
CCTAACCTGA TCGGTTACAA GGATGGCCTG GGTGATATCG AGCTGATGGT TTCGATCCGC
CGCCGTCTCG GTGACCGTTT CTCGTACCTG GGCGGCCTGC CGACCGCTGA AGTCTATGCC
GCTGCCTACA AGGCGCTGGG CGTGCCGGTC TACTCGTCCG CAGTGTTCAA CTTCGTACCG
AAACTGGCGA TGGACTTCTA CCACGCCATC GCCCGCGACG ATCATCAGGC GGTCGGCAAG
TACATCGACG ATTTCTTCCT GCCTTACCTG GAAATCCGCA ACCGCAAGGC CGGTTATGCC
GTGAGCATCG TCAAGGCCGG CGCGAAGATC GCCGGTTATG ACGCAGGTCC GGTGCGCGCA
CCGTTGACCG ATCTGACGTC AGACGAGTGC GACATGCTCG CTGCACTGAT GGACAAGCAG
GGCAAGCAGT AA
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| Protein sequence | MNPQELKSIL SSGLLSFPVT DFNAQGDFHR AGYIKRLEWL APYGASALFA AGGTGEFFSL
AASEYSEIIK TAVDTCATSV PILAGVGGAT RQAIEYAQEA ERLGAKGLLL LPHYLTEASQ
DGVAAHVEAV CKSVKIGVVV YNRNVCRLTP TLLEQLAERC PNLIGYKDGL GDIELMVSIR
RRLGDRFSYL GGLPTAEVYA AAYKALGVPV YSSAVFNFVP KLAMDFYHAI ARDDHQAVGK
YIDDFFLPYL EIRNRKAGYA VSIVKAGAKI AGYDAGPVRA PLTDLTSDEC DMLAALMDKQ
GKQ
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