| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4210 |
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| Symbol | nhaA |
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| ID | 3369750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5014645 |
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| End bp | 5015823 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637654570 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | YP_237278 |
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| Protein GI | 66047437 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.400142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAAAC CCACCCCTCG TACCGAATCC CCGAATGCAC TGGCGTTCAT CACGCGTTTC
TTCGCTGCTG AATCCGCTGG CGGGCTGGTG TTGATGGCAG CCGCGCTGGC GGCCCTGATC
GTTGCCAACT CACCGCTGGG CGACAGCTAC TTCGCCGCGC TGCACGCAGT GTTCGCCGGT
TTGTCGGTTT CGCACTGGAT CAACGACGGT CTGATGGCGA TCTTCTTCAT GCTCGTCGGC
CTGGAGATCA AGCGCGAGGT GCTCGCCGGT CAGCTTGCCT CCTGGAGCCA GAGAGCCTTG
CCGGGCTTTG CGGCGCTTGG CGGCATGCTG GTTCCGGCGC TGATCTACGT GGCCTTCAAC
TGGGGGCGGC CAGACACCAT CGGCGGCTGG GCCATTCCGG CAGCGACCGA TATCGCGTTC
GCCCTGGGTG TGCTGTCACT GCTGGGCAAG CGCGTGCCGC TGTCGCTTAA GATCTTCCTG
TCGGCACTGG CGATTCTCGA TGATCTCGGC GCGGTGCTGA TCATCGCGTT GTTCTACACC
AGCGATCTCT CCATTCCCAT GCTGCTCGCA GCGCTGGGCT CCATCGCCAT GCTCGTCGCG
CTGAATCGTC TGGGTGTTAA AAAACTGCTG CCTTACCTCA TCGTCGGCGC GCTGCTGTGG
TTTTTCATGC TCCAGTCCGG CATCCACGCC ACCCTCGCGG GCGTCGCGCT GGCGCTGTGC
ATCCCGTTGG GCAAACCCGA TGAAGAGGCC CGCTCGCCGC TGCTGCACCT GGAAGAAAAG
CTGCACCCAT GGGTGGCGTT TGCCGTCGTA CCGATCTTTG GTTTTGCCAA CGCTGGCGTG
TCACTGTCGG GCATTACCGC CGACACGCTC GTGGACCCGG TCCCGCTCGG CGTTGCGCTA
GGACTGCTGG TCGGCAAACA GGTCGGCATA TTCGCCATGG CCGCGCTGGC GATTCGCGCA
GGCCTGGCGC GCTTGCCGGA TGGCAGCAAC TGGGGCCAGC TTTATGGCGT TGCAGCCTTG
TGTGGTATCG GCTTCACCAT GAGCCTGTTC ATTGGCGCAC TGGCCTTCCC GGGCGCGCCG
GAACTGGTCG ATGAGGTCAA GGTGGGCGTG CTGATCGGTT CGGTGTTGTC GGCTGTGCTG
GGTGTGGTGG TGTTGCGCAG GTTTGCGCAG CGGGGGTGA
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| Protein sequence | MHKPTPRTES PNALAFITRF FAAESAGGLV LMAAALAALI VANSPLGDSY FAALHAVFAG
LSVSHWINDG LMAIFFMLVG LEIKREVLAG QLASWSQRAL PGFAALGGML VPALIYVAFN
WGRPDTIGGW AIPAATDIAF ALGVLSLLGK RVPLSLKIFL SALAILDDLG AVLIIALFYT
SDLSIPMLLA ALGSIAMLVA LNRLGVKKLL PYLIVGALLW FFMLQSGIHA TLAGVALALC
IPLGKPDEEA RSPLLHLEEK LHPWVAFAVV PIFGFANAGV SLSGITADTL VDPVPLGVAL
GLLVGKQVGI FAMAALAIRA GLARLPDGSN WGQLYGVAAL CGIGFTMSLF IGALAFPGAP
ELVDEVKVGV LIGSVLSAVL GVVVLRRFAQ RG
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