Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4196 |
Symbol | |
ID | 3369735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4992730 |
End bp | 4993293 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637654556 |
Product | heat shock protein GrpE |
Protein accession | YP_237264 |
Protein GI | 66047423 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00395445 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACG AACAGAATCT GGATGCGCAG GCTCAGGATC AGGCTGCCGA GGCGGGCGCG GGTGACGAAC TGACAACCCG CGTGCAGGTG CTCGAAGAGC AACTGGCTGC TGCGCAGGAC CAATCCCTTC GCGTGGCTGC GGATCTGCAG AATGTCCGCC GCCGTGCCGA ACAGGATGTT GAAAAGGCGC ACAAGTTTGC GCTGGAGAAA TTTGCCGGTG ATCTGTTGCC GATCATCGAC AGTCTGGAGC GAGGCCTTGA TCTGTCCAGT CCGGACGATG AAAGCATTCG CCCGATGCGT GAAGGCATCG AGCTGACCTT GAAGATGTTC CAGGACACCC TCAAGCGTTA TCAGCTGGAA GCCATCGATC CGCACGGTCA ACCGTTCAGT GCCGACCAGC ACCAGGCGAT GGCCATGCAG GAAAGTGCCG ACGTTGAGCC CAACACGGTG CTCAAGGTAT TTCAGAAGGG TTATCAGCTT AATGGTCGCC TGTTGCGCCC GGCCATGGTC GTGGTCAGCA AGGCACCATC GCCTGCAACG CCGTCAATCA ACGAGCAGGC TTGA
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Protein sequence | MADEQNLDAQ AQDQAAEAGA GDELTTRVQV LEEQLAAAQD QSLRVAADLQ NVRRRAEQDV EKAHKFALEK FAGDLLPIID SLERGLDLSS PDDESIRPMR EGIELTLKMF QDTLKRYQLE AIDPHGQPFS ADQHQAMAMQ ESADVEPNTV LKVFQKGYQL NGRLLRPAMV VVSKAPSPAT PSINEQA
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