Gene Psyr_4196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4196 
Symbol 
ID3369735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4992730 
End bp4993293 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content59% 
IMG OID637654556 
Productheat shock protein GrpE 
Protein accessionYP_237264 
Protein GI66047423 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00395445 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG AACAGAATCT GGATGCGCAG GCTCAGGATC AGGCTGCCGA GGCGGGCGCG 
GGTGACGAAC TGACAACCCG CGTGCAGGTG CTCGAAGAGC AACTGGCTGC TGCGCAGGAC
CAATCCCTTC GCGTGGCTGC GGATCTGCAG AATGTCCGCC GCCGTGCCGA ACAGGATGTT
GAAAAGGCGC ACAAGTTTGC GCTGGAGAAA TTTGCCGGTG ATCTGTTGCC GATCATCGAC
AGTCTGGAGC GAGGCCTTGA TCTGTCCAGT CCGGACGATG AAAGCATTCG CCCGATGCGT
GAAGGCATCG AGCTGACCTT GAAGATGTTC CAGGACACCC TCAAGCGTTA TCAGCTGGAA
GCCATCGATC CGCACGGTCA ACCGTTCAGT GCCGACCAGC ACCAGGCGAT GGCCATGCAG
GAAAGTGCCG ACGTTGAGCC CAACACGGTG CTCAAGGTAT TTCAGAAGGG TTATCAGCTT
AATGGTCGCC TGTTGCGCCC GGCCATGGTC GTGGTCAGCA AGGCACCATC GCCTGCAACG
CCGTCAATCA ACGAGCAGGC TTGA
 
Protein sequence
MADEQNLDAQ AQDQAAEAGA GDELTTRVQV LEEQLAAAQD QSLRVAADLQ NVRRRAEQDV 
EKAHKFALEK FAGDLLPIID SLERGLDLSS PDDESIRPMR EGIELTLKMF QDTLKRYQLE
AIDPHGQPFS ADQHQAMAMQ ESADVEPNTV LKVFQKGYQL NGRLLRPAMV VVSKAPSPAT
PSINEQA