Gene Psyr_4182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4182 
Symbol 
ID3369719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4975660 
End bp4976136 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content54% 
IMG OID637654540 
Producthypothetical protein 
Protein accessionYP_237250 
Protein GI66047409 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.844103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAGG GGGTTCAGGT GTCGAGCAAG CTAGAACAGT TGCAGGACTT GTTGGCCCCA 
GTGGTCGTGG CCCTTGGCTA CCAATGCTGG GGAATCGATT TCAGTTCCCA GGGCAAGCAT
TCGGTGCTGC GCATTTATAT CGACAAGGAA GGGGGCGTTC TGGTCGACGA CTGTGCAATC
GTCAGTCGCC AGATCAGCGG TGTGTTGGAC GTAGAAGATC CAATCAGCAC CGAGTACACC
CTTGAAGTAT CTTCTCCTGG CATGGAGCGC CCGCTGTTCA CTATTGAGCA GTTTGCTTCG
TACGCCGGGG AACAAGTGAA AATAAAGCTG CGTTCACCTT TCGAAGGTCG ACGCAACTTT
CAAGGCCTTC TCCGCGGGGT GGAGGAGCAG GATGTCGTGG TGCAGGTTGA AGACCATGAG
TTCCTGTTGC CGATCGACAT GATCGACAAG GCCAACATTA TTCCCACGTT TGACTGA
 
Protein sequence
MHEGVQVSSK LEQLQDLLAP VVVALGYQCW GIDFSSQGKH SVLRIYIDKE GGVLVDDCAI 
VSRQISGVLD VEDPISTEYT LEVSSPGMER PLFTIEQFAS YAGEQVKIKL RSPFEGRRNF
QGLLRGVEEQ DVVVQVEDHE FLLPIDMIDK ANIIPTFD