Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4161 |
Symbol | |
ID | 3369698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4950807 |
End bp | 4951298 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637654519 |
Product | rod shape-determining protein MreD |
Protein accession | YP_237229 |
Protein GI | 66047388 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAGTC ATGTTTCCGG GCGCAATGGC TGGGTGGTCT GGCTGACGTT TGCGATCGGT CTGCTGCTGA GCGTTTCGCC GCTGCCGCAA TTCATGGAAA TCTTCCGGCC ACTGTGGCTG GCCCTGCTGC TGACCTTCTG GGTTCTGGCG CTGCCGCACA AATACGGCAT GACCACCGCG TGGATACTGG GCCTGATGGA GGATGTGCTG TACGGCACCT TGCTCGGCCA GAACGCCCTG ATCCTCAGTC TGATCACCTT TCTGGTGATG TCCCTGCAGC AGCGCCTGCG CATGTTTCCC ATGTGGCAAC AATGCCTGGT GCTGCTGGTG GTATTCGGTC TGGCACAGCT TGCGCAACTC TGGCTCAGCG CGCTGACCGG CAACCGTCAG CCAACGCTGG CGCTGGTGCT GCCCGCGTTG GTCAGTGCTC TGTTGTGGCC CTGGATCAGT TATGGCCTGC GTGGATTGCG CAAACGTTTG AAAATCAATT AA
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Protein sequence | MVSHVSGRNG WVVWLTFAIG LLLSVSPLPQ FMEIFRPLWL ALLLTFWVLA LPHKYGMTTA WILGLMEDVL YGTLLGQNAL ILSLITFLVM SLQQRLRMFP MWQQCLVLLV VFGLAQLAQL WLSALTGNRQ PTLALVLPAL VSALLWPWIS YGLRGLRKRL KIN
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