Gene Psyr_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4161 
Symbol 
ID3369698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4950807 
End bp4951298 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID637654519 
Productrod shape-determining protein MreD 
Protein accessionYP_237229 
Protein GI66047388 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAGTC ATGTTTCCGG GCGCAATGGC TGGGTGGTCT GGCTGACGTT TGCGATCGGT 
CTGCTGCTGA GCGTTTCGCC GCTGCCGCAA TTCATGGAAA TCTTCCGGCC ACTGTGGCTG
GCCCTGCTGC TGACCTTCTG GGTTCTGGCG CTGCCGCACA AATACGGCAT GACCACCGCG
TGGATACTGG GCCTGATGGA GGATGTGCTG TACGGCACCT TGCTCGGCCA GAACGCCCTG
ATCCTCAGTC TGATCACCTT TCTGGTGATG TCCCTGCAGC AGCGCCTGCG CATGTTTCCC
ATGTGGCAAC AATGCCTGGT GCTGCTGGTG GTATTCGGTC TGGCACAGCT TGCGCAACTC
TGGCTCAGCG CGCTGACCGG CAACCGTCAG CCAACGCTGG CGCTGGTGCT GCCCGCGTTG
GTCAGTGCTC TGTTGTGGCC CTGGATCAGT TATGGCCTGC GTGGATTGCG CAAACGTTTG
AAAATCAATT AA
 
Protein sequence
MVSHVSGRNG WVVWLTFAIG LLLSVSPLPQ FMEIFRPLWL ALLLTFWVLA LPHKYGMTTA 
WILGLMEDVL YGTLLGQNAL ILSLITFLVM SLQQRLRMFP MWQQCLVLLV VFGLAQLAQL
WLSALTGNRQ PTLALVLPAL VSALLWPWIS YGLRGLRKRL KIN