Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4156 |
Symbol | |
ID | 3369693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4942351 |
End bp | 4943790 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637654514 |
Product | peptidase U62, modulator of DNA gyrase |
Protein accession | YP_237224 |
Protein GI | 66047383 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.867703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATC TGTCCTCAGT CAGCGAACAC CTTCTGGCAC CCGGCGGCCT GAACCTCGAC AGCCTGCAGT CCGTGCTGGG CGATCTGGCC GGACCAGGCA TCGACGCGGC CGATCTGTAT TTTCAGGGCA TGATCTCCGA GTCCTGGTCG CTCGAAGACG GGATCGTCAA GGAAGGCAGT TTCAATCTCG ATCAAGGCGT TGGCGTGCGT GCCCAGTCGG GCGAGAAAAC CGGCTTTGCG TACAGCAACG CGATCACCCC CGAGGCCCTG CGCACCGCCG CACAGGCCGC GCGCTCTATT TCCCGCGCAG GCCAGAATGG TCGCGTGCAG GCTTTCACCT CGCAGGACGT GGCACAGTTG TATGCCCCGG ACAACCCGCT GGAAGTACTG AGCCGCGCCG AGAAAGTCGA GTTGCTCAAG CGCATCGACG TCGCAACGCG TGCGCTGGAC TCGCGTATCC AGCAGGTTTC GGTGAGCATG GCCGGTGTCT GGGAGCGCAT CCTGGTGGCC GCCGCGGATG GCAGCCTGGC CGCTGATGTG CGACCGCTGG TGCGTTTCAA CGTCAGTGTC ATCGTCGAGC AGAATGGCCG TCGCGAGCGT GGCGGGCATG GCGGCGGCGG GCGTACCGAT TACCGTTATT TCCTGACCGA CGATCGCGCC ATGGGCTACG CCCGTGAGGC CCTGCGTCAG GCACTGGTCA ACCTGGAAGC GATTCCTGCA CCGGCAGGCA CCTTGCCGGT GGTACTCGGC TCCGGCTGGT CCGGTGTGCT GCTGCACGAA GCGGTCGGTC ACGGCCTTGA GGGTGACTTC AACCGCAAGG GCAGCTCGGC CTACAGCGGG CGCATGGGCG AGATGGTTGC CTCGAAACTC TGCACCATCG TCGACGACGG CACCCTGGCG GGGCGTCGTG GCTCGCTGAG CGTGGATGAC GAAGGCACAC CGACCGAATG CACTACGCTG ATCGAGAACG GCGTACTCAA GGGCTACATG CAGGACAAAC TCAATGCGCG CCTGATGGGT GTGGCGCGCA CCGGCAACGG CCGTCGCGAG TCCTATGCCC ACCTGCCGAT GCCGCGCATG ACCAACACCT ACATGCTGGG CGGGCAGAGC GATCCGCAGG AAATCATCGC CTCAGTAAAG CGCGGCATCT ATTGCGCCAA CCTGGGCGGT GGTCAGGTGG ATATCACCAG CGGCAAGTTC GTGTTTTCGA CCAGTGAGGC CTATTTGATC GAAGATGGCA AGATCACTGC GCCGGTCAAA GGCGCGACCT TGATCGGTAA CGGGCCGGAA GCCATGAGCA GGGTATCGAT GGTGGGTAAC GATCTGTCGC TGGACAGTGG CGTCGGCACA TGCGGGAAAG ATGGCCAGTC GCTGCCGGTC GGTGTGGGTC AGCCTACGCT GAAAATCGAC GCGATTACCG TGGGTGGCAC CGGTAGCTGA
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Protein sequence | MSDLSSVSEH LLAPGGLNLD SLQSVLGDLA GPGIDAADLY FQGMISESWS LEDGIVKEGS FNLDQGVGVR AQSGEKTGFA YSNAITPEAL RTAAQAARSI SRAGQNGRVQ AFTSQDVAQL YAPDNPLEVL SRAEKVELLK RIDVATRALD SRIQQVSVSM AGVWERILVA AADGSLAADV RPLVRFNVSV IVEQNGRRER GGHGGGGRTD YRYFLTDDRA MGYAREALRQ ALVNLEAIPA PAGTLPVVLG SGWSGVLLHE AVGHGLEGDF NRKGSSAYSG RMGEMVASKL CTIVDDGTLA GRRGSLSVDD EGTPTECTTL IENGVLKGYM QDKLNARLMG VARTGNGRRE SYAHLPMPRM TNTYMLGGQS DPQEIIASVK RGIYCANLGG GQVDITSGKF VFSTSEAYLI EDGKITAPVK GATLIGNGPE AMSRVSMVGN DLSLDSGVGT CGKDGQSLPV GVGQPTLKID AITVGGTGS
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