Gene Psyr_4146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4146 
Symbol 
ID3369683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4933669 
End bp4934394 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content58% 
IMG OID637654504 
ProductABC transporter 
Protein accessionYP_237214 
Protein GI66047373 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGC TCAAAGCCCA GCATCTCGCT AAAAGCTACA AAAGCCGGCA GGTCGTGCGC 
GATGTGAGCA TTTCCATCGA CAGCGGCCAG ATCGTCGGCC TGCTGGGCCC GAACGGCGCC
GGCAAGACCA CCTGTTTCTA CATGATAGTG GGTCTGGTCC AGGCTGATCA GGGTCGTGTG
CTGATTGACG ATCTGGATGT CAGCCATCAA CCCATGCACG GTCGCGCCCG CGCGGGCATC
GGCTATCTGC CTCAGGAAGC CTCGATTTTT CGCAAGCTGT CGGTGTCCGA CAACATCATG
GCGATTCTCG AGACCCGCAA GGAGCTCGAT GCCGGTGCGC GCCGCAAGGA ACTGGAAAGC
CTCCTGCAGG AGTTCCACAT CACCCATATC CGCGACAACC TGGGCATGAG CCTGTCCGGC
GGTGAACGTC GCCGCGTGGA AATCGCTCGA GCCTTGGCCA CCGCACCGAA ATTCATCCTG
CTGGATGAAC CGTTCGCAGG TGTCGACCCT ATTTCGGTAG GCGACATCAA GCAGATCATT
CACCATCTCA AGGCCAAGGG TATCGGTGTA CTGATCACTG ACCACAACGT CCGGGAAACG
CTGGATATCT GCGAAATGGC CTACATCGTC AACGATGGAC AGCTGATTGC GGAAGGCGAC
TCCGAGACCA TTCTGGCGAA TCAGCTGGTG AAAGAGGTCT ACCTCGGCCA CGAGTTCCGC
CTTTAA
 
Protein sequence
MATLKAQHLA KSYKSRQVVR DVSISIDSGQ IVGLLGPNGA GKTTCFYMIV GLVQADQGRV 
LIDDLDVSHQ PMHGRARAGI GYLPQEASIF RKLSVSDNIM AILETRKELD AGARRKELES
LLQEFHITHI RDNLGMSLSG GERRRVEIAR ALATAPKFIL LDEPFAGVDP ISVGDIKQII
HHLKAKGIGV LITDHNVRET LDICEMAYIV NDGQLIAEGD SETILANQLV KEVYLGHEFR
L