Gene Psyr_4140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4140 
Symbol 
ID3369677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4929128 
End bp4929925 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content58% 
IMG OID637654498 
Producthypothetical protein 
Protein accessionYP_237208 
Protein GI66047367 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATA AGTCACTCAT GGACCGGGTT CGCCTGCTGG GGCGCTCGGC CATTGATATT 
GTTACTGTTC TGGGGCGTTC CGGTCTGTTT CTGGTGCATG CCTTGCTCGG TCGTGGCGGT
GCGGGCAGCA GTTTCCAACT GCTGGTCAGG CAGCTGTATT CGGTTGGCGT CATGTCGCTG
GTCATCATTG TGGTGTCCGG CATGTTCATC GGCATGGTGC TGGCGCTGCA GGGCTTCAGC
ATCCTGACCA AATACGGTTC GGAGCAGGCG GTTGGCCAGA TGGTTGCCCT GACGCTGTTG
CGTGAACTCG GCCCTGTGGT GACGGCCTTG CTGTTCGCCG GTCGTGCGGG CTCTGCGTTG
ACCGCCGAGA TCGGCAACAT GAAGTCCACC GAGCAGCTGT CGAGCCTTGA AATGATCGGT
GTCGATCCGC TCAAGTACAT CGTGGCGCCG CGTCTGTGGG CCGGGTTCAT CTCGCTGCCG
ATTCTGGCGA TGATCTTCAG CGTGGTCGGT ATCTGGGGCG CTTCCTGGGT GGCGATCGAT
TGGCTGGGAG TCTATGACGG TTCTTTCTGG TCGAACATGC AGAATAGCGT TTCTTTCACG
AACGATGTGC TCAATGGGGT GATCAAAAGC GTCGTATTTG CCTTCGTGGT GACATGGATT
GCCGTTTTCC AGGGTTACGA TTGCGAGCCT ACTTCCGAGG GGATCAGTCG CGCGACGACC
AGAACCGTCG TTTACGCCTC GTTGGCCGTG CTGGGACTGG ACTTTATTTT GACCGCTTTG
ATGTTTGGAG ATTTCTGA
 
Protein sequence
MRNKSLMDRV RLLGRSAIDI VTVLGRSGLF LVHALLGRGG AGSSFQLLVR QLYSVGVMSL 
VIIVVSGMFI GMVLALQGFS ILTKYGSEQA VGQMVALTLL RELGPVVTAL LFAGRAGSAL
TAEIGNMKST EQLSSLEMIG VDPLKYIVAP RLWAGFISLP ILAMIFSVVG IWGASWVAID
WLGVYDGSFW SNMQNSVSFT NDVLNGVIKS VVFAFVVTWI AVFQGYDCEP TSEGISRATT
RTVVYASLAV LGLDFILTAL MFGDF