| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4131 |
|---|
| Symbol | |
|---|
| ID | 3369668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4921241 |
|---|
| End bp | 4922170 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637654489 |
|---|
| Product | IS111A/IS1328/IS1533 |
|---|
| Protein accession | YP_237199 |
|---|
| Protein GI | 66047358 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0485642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCT ATGCCGGTAT TGATGTTTCC AAGGCCACGC TGCAGGTTGC GCTGTTTCCC
AAAGCGGATG AGCTGTGTGT ACCTAATACT GAAGAAGGTC TCGCCAGCAT TGCCGAGTAC
CTCAGCGCCC ATCAGGTTGA GCGCGTTCTT GTTGAAGCCA CCGGTGGTTA CGAGAAACTG
TCGGTAAAGC TTCTGGCTAA TGCAGGGTTC AAGGTCCAGC GTATTAACCC TGTTCGCTCA
CGTCAGTTCG CTCTGGCCAT GGGCAAGCGT GCCAAGACCG ATCCAATCGA TGCGCAAATG
CTGGCCATGT TCGCCTCCAG CCTGGAGGCG AAGGGCTTCG CAAAGCCTGA CGAGGAGCGC
GAAGTCCTGC TTGAGCTGGT GAACTTGCGC AACAACCTGC TTCAACAACG TGACGACAAC
CGGCGCCGTA TCAAACAGGC CCTATTGCCC AGCGTGGTGT ACATTTACCT TGCGTTGGAA
GCCAGCCTCA AAGTGCAGAT CAAAGCGGTA GATCAGCTTG TCGATGCACA AGCGCGCAAG
GTCGACTCAG AACTGCTGCA GCGGCTGCAT GCCGTAAAGG GCGTAGGCCC AGTGACAATC
GCCAGCCTGT TCTGCTACCT GCCAGAGCTG GGTGACCTGA GTCGTGGACA AATCGCAGCG
TTAGCCGGTG TGGCACCGTA TAACAACGAC AGCGGTAGCA AGGTCGGCAA GCGGCAGATC
TACGGTGGGC GGACGAAACT GCGCCGTGCG ACCTACATGT GTGCGCTGGT GATGGTGCGC
TATAACGCCG ATTTCAAGGA GCGCTATGCG AGGCTGCGTG CCAAAGGCAA GTGCGCGAAA
GTGGCCCTGG TGGCCTGCAT GCGGGTGTTG CTGATACGCC TGAACGCCAT GGTGCGCGAC
GGAACACCAT GGCGTGATCA TGCGGTTTGA
|
|---|
| Protein sequence | MSAYAGIDVS KATLQVALFP KADELCVPNT EEGLASIAEY LSAHQVERVL VEATGGYEKL
SVKLLANAGF KVQRINPVRS RQFALAMGKR AKTDPIDAQM LAMFASSLEA KGFAKPDEER
EVLLELVNLR NNLLQQRDDN RRRIKQALLP SVVYIYLALE ASLKVQIKAV DQLVDAQARK
VDSELLQRLH AVKGVGPVTI ASLFCYLPEL GDLSRGQIAA LAGVAPYNND SGSKVGKRQI
YGGRTKLRRA TYMCALVMVR YNADFKERYA RLRAKGKCAK VALVACMRVL LIRLNAMVRD
GTPWRDHAV
|
|---|
| |