Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4108 |
Symbol | |
ID | 3369644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4898461 |
End bp | 4900191 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637654466 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_237176 |
Protein GI | 66047335 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.221259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAC TTGATGGCGC TCTTTATCCG TGGCGTTTTC GCGTAGTCGT GGGGCTGCTG GTGTCCCTCG TGCTCGCCAT TTGCTGGCGC ATTGTCGACC TGCAGGTCAT CGACCATACC TTTCTCAAGG AACAGGGCGA TGCACGCAGC CTTCGGCATA TCCCTATTCC GGCGCACCGT GGCCTGATCA CCGACCGTAA CGGCGAGCCG CTGGCGGTCA GTACTCCGGT GACGACGCTG TGGGCCAACC CGCGTGAAAT GCAGCAGGAC AAGTCCAAGT GGCCGATGCT GGCCGCCGCG CTGGGCCAGG ATCTCAAGGC ATTGACCGAG CGTCTGGACT CGCAGGCGAA CAAGGAATTC ATCTACCTGG TCCGTGGCCT GACGCCAGAA CAGGGCCAGT CGGTCATCGA TCTGAAAGTG CCCGGCGTTT ACGGCATCGA AGAGTTCCGC CGCTTTTATC CGGCCGGCGA TGTCACCGCA CACATGGTCG GCTTTACCGA CCTTGACGAC CATGGCCGGG AAGGCGTCGA GCTGGCCTAT GACGACTGGC TCGCCGGTGT GCCCGGCAAG CGTCAGGTCA TCAAGGACCG GCGCGGCCGA CTGATCAAGG ATGTTCAGGT CACCAAGAAT GCCAAGGCCG GAAAGACCTT GGCTTTGTCT ATTGACCTGC GCCTGCAGTA CCTGGCGACC CGTGAACTGC GCAATGCCAT CGTCGAGAAC GAGGCCAAGG CCGGCAGCAT GGTGATCATG GACGTCAAGA CCGGTGAGGT TCTGGCGATG GTCAACCAGC CGACCTATAA CCCGAACAAC CGTCGCACCA TGGTGCCTGC CGCCATGCGC AACCGGGCCA TCATCGACGT GTTCGAACCC GGTTCGACCA TGAAGCCGAT CTCCATGACC GCAGCGCTGG ACAGTGGCCG CTGGAAGCCG ACCGACAAGG TCGAGGTTTA TCCGGGCACC CTGCAGATCG GCAAGTACAC GATTCGTGAC GTGACCAAGA CCGAAGGCCC GATCCTCGAT CTGACCGGCA TTCTGATCAA CTCCAGTAAC GTCGGCATGA GCAAGGTTGC GTTTGATGTG GGCGGTGAGG CGATCTTCCG TGCCATGCAG CGCGTCGGTT TCGGTCAGTA CACCGGTCTC GGCTTCCCTG GCGAGCGCGT CGGCAACCTG CCCAACTACC GTGAATGGCG CAAGGCCGAA ACCGCCACGC TGTCCTATGG CTACGGTCTG TCGGTCACGG CCTTGCAGCT GGTGCATGCC TACGGCGCGC TGGCCAACAA TGGCCGCATC GTGCCGTTGA CCATCCTGAA AACAGATAAA GAGCCGGAGT CGACCCAGGC CATTCCGGAG AAAACCGCGA AGACCCTGCA AGGCATGTTG CAGCAGGTTA TCGAGGACCC ACGCGGCGTC TATCGCGCCC GTGTGCCGTC CTACCACGTC GGCGGCAAGA GTGGTACGGC GCGCAAGACG TCCATTGGCA CCAAGGGCTA TGCGGAAAAT TCCTATCGCT CGCTGTTCGC CGGTTTCGGC CCGATGAGTA ACCCGCGTTA CGCCATCGTG GTGGTCATCG ACGAGCCGAG CAAGGGTGGT TACTACGGTG GTCTGGTTTC GGCCCCGGTA TTCAGCAAGG TCATGTCCGG CACGTTGCGT CTGATGAACG TGACGCCGGA CAACCTTGCG CCACCTGAAC AAGTCAACGC CGCACCGGCA GCCAAAGGAG GGCGTGGTTG A
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Protein sequence | MMKLDGALYP WRFRVVVGLL VSLVLAICWR IVDLQVIDHT FLKEQGDARS LRHIPIPAHR GLITDRNGEP LAVSTPVTTL WANPREMQQD KSKWPMLAAA LGQDLKALTE RLDSQANKEF IYLVRGLTPE QGQSVIDLKV PGVYGIEEFR RFYPAGDVTA HMVGFTDLDD HGREGVELAY DDWLAGVPGK RQVIKDRRGR LIKDVQVTKN AKAGKTLALS IDLRLQYLAT RELRNAIVEN EAKAGSMVIM DVKTGEVLAM VNQPTYNPNN RRTMVPAAMR NRAIIDVFEP GSTMKPISMT AALDSGRWKP TDKVEVYPGT LQIGKYTIRD VTKTEGPILD LTGILINSSN VGMSKVAFDV GGEAIFRAMQ RVGFGQYTGL GFPGERVGNL PNYREWRKAE TATLSYGYGL SVTALQLVHA YGALANNGRI VPLTILKTDK EPESTQAIPE KTAKTLQGML QQVIEDPRGV YRARVPSYHV GGKSGTARKT SIGTKGYAEN SYRSLFAGFG PMSNPRYAIV VVIDEPSKGG YYGGLVSAPV FSKVMSGTLR LMNVTPDNLA PPEQVNAAPA AKGGRG
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