Gene Psyr_4105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4105 
SymbolmraY 
ID3369641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4894553 
End bp4895635 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content59% 
IMG OID637654463 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_237173 
Protein GI66047332 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.528973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGC TGTTGGCCGA GTTTTTACAA CAGTTCTACA AAGGCTTCGC GGTCTTTCAG 
TACCTGTCAT TGCGCGGGAT TCTTGGCGTG CTCACTGCAC TGACGCTGTC GCTGTGCCTG
GGGCCGTGGA TGATCCGCAC CCTGCAGATG CGTCAGATCG GTCAGTCGGT GCGTAACGAC
GGTCCGCAGT CGCACCTGTC CAAGTCCGGC ACGCCGACCA TGGGCGGGGC GCTGATCCTG
TCGTCCATTG GTATCAGTAC GTTGCTGTGG GCTGACCTGA GCAACCGTTA CGTGTGGGTC
GTGTTGCTGG TGACCTTCCT GTTCGGCGCG ATCGGTTGGG TCGATGACTA CCGCAAGGTG
ATCGAAAAGA ATTCGCGGGG CCTGCCGAGC CGCTGGAAGT ATTTCTGGCA GTCGGTATTC
GGCCTCTGTG CCGCGATCTT CCTTTACACG ACTGCGCCGT CGGCAACCGA AACCACGCTG
ATCGTGCCGA TGCTCAAGGA TGTGCGCATC CCGCTGGGTA TCGGTTTCAT CGTACTGACC
TATTTCGTGA TCGTCGGCTC CAGCAACGCA GTCAACCTGA CTGACGGCCT GGACGGTCTG
GCGATCATGC CAACGGTGAT GGTGGGCGGT GCTTTGGGCA TTTTCTGCTA CCTGTCGGGT
AACGTTAAAT TTGCTGAATA CCTGCTGATT CCCTACGTGC CGGGGGCGGG CGAGCTGATT
GTGTTTTCTG GCGCGCTGAT TGGCGCCGGG CTGGGGTTCC TCTGGTTCAA CACGTATCCG
GCGCAGGTGT TCATGGGCGA CGTCGGTGCG CTGGCACTCG GCGCGGCGCT GGGCACCATG
GCGGTGATCG TTCGTCAGGA AATGGTCCTG TTCATCATGG GCGGCGTGTT CGTGATGGAA
ACCCTTTCAG TGGTCATTCA GGTTGCGTCT TTCAAACTTA CCGGCCGCCG CGTATTCCGC
ATGGCGCCGA TCCACCACCA CTTTGAACTC AAAGGCTGGC CCGAGCCACG TGTGATCGTC
CGTTTCTGGA TCATCACCGT GATTCTGGTG CTCATTGGCC TTGCCACGCT GAAACTGAGG
TAG
 
Protein sequence
MLLLLAEFLQ QFYKGFAVFQ YLSLRGILGV LTALTLSLCL GPWMIRTLQM RQIGQSVRND 
GPQSHLSKSG TPTMGGALIL SSIGISTLLW ADLSNRYVWV VLLVTFLFGA IGWVDDYRKV
IEKNSRGLPS RWKYFWQSVF GLCAAIFLYT TAPSATETTL IVPMLKDVRI PLGIGFIVLT
YFVIVGSSNA VNLTDGLDGL AIMPTVMVGG ALGIFCYLSG NVKFAEYLLI PYVPGAGELI
VFSGALIGAG LGFLWFNTYP AQVFMGDVGA LALGAALGTM AVIVRQEMVL FIMGGVFVME
TLSVVIQVAS FKLTGRRVFR MAPIHHHFEL KGWPEPRVIV RFWIITVILV LIGLATLKLR