Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4101 |
Symbol | murC |
ID | 3369637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4889477 |
End bp | 4890937 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654459 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_237169 |
Protein GI | 66047328 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.506698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.60391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAGA ATCAACGCGC CATGCCACAA CCTGAAATGC GCCGTATCCG TCGTATCCAC TTCGTCGGTA TCGGCGGCGT AGGCATGTGC GGGATCGCCG AGGTGTTGTT GAACCTGGGC TACGAAGTCT CGGGCTCCGA CCTGAAGGGC TCGGCCGTGA CCGAACGCCT GGAATCGTTC GGCGCACAGA TTTTCATCGG CCATCGTGCC GAGAACACCA TCGGTGCCGA CGTGCTGGTA GTGTCCAGTG CCGTCAACAC CTCCAACCCG GAAGTGGCCA CTGCCCTGGA GCGCCGCATT CCGGTCGTAC CGCGTGCCGA GATGCTCGCC GAGCTGATGC GTTATCGCCA CGGCATCGCC GTTGCCGGTA CGCATGGCAA GACCACCACC ACCAGCCTGA TCGCTTCGGT ATTCGCTGCC GGCGGCCTGG ACCCGACCTT CGTGATTGGC GGCCGTCTCA ATGCGGCAGG CACCAATGCG CAGTTGGGCA CCAGCCGCTA CCTGATCGCC GAAGCCGATG AAAGCGACGC CAGCTTCCTG CACCTGCAGC CTCTGGTCGC AGTGGTCACC AATATCGACG CCGATCACAT GGCGACCTAC GAAGGCGACT TCAACAAACT GAAGAAGACC TTCGTCGAGT TCCTGCACAA CCTGCCGTTC TACGGGCTGG CAGTCATGTG CATCGACGAC CCGGTGGTGC GTGAGATTCT GCCGCTGGTC AAGCGTCCGA CGCTGACCTA CGGCTTCAGC GAGTCTGCCG ATATACGCGC AATCAATGTG CGTCAGGACG GCATGCTGAC CTTCTTCACC GTACTGCGCC GCGACCGCGA GCCGCTGGAT GTGTCGGTGA ACATGCCCGG CAATCACAAC GTACTCAACT CGCTGGCGAC CATTGCCATC GCCACTGATG AGGGTGTCAG CGACGAGGCC ATCGTTCAGG GCCTTTCCGG GTTCCAGGGC GTCGGTCGGC GCTTCCAGGT TTACGGCGAG CTGCCGGTCG ACGGTGGTCA CGTGATGCTG GTCGATGACT ACGGTCACCA CCCGCGCGAA GTCGCAGCCG TGATTAACGC TGTGCGTGGC GGCTGGCCTG ATCGTCGTCT GGTAATGGTT TACCAGCCAC ACCGTTTCAG CCGCACCCGT GACCTGTACG ACGATTTCGT CCAGGTCCTG GCGGACGCCA ATGTGCTGCT GCTGATGGAA GTCTACCCGG CCGGTGAAGA ACCGATTCCC GGTGCGGACA GCCGTAACCT GTGCCATAGC ATTCGTCAGA GTGGCCAACT GGACCCGATC TACATCGAGC GTGGCGTCGA GCTGGCGCCG TTGGTCAAGC CGCTGCTGCG CGCCGGCGAC ATCCTGCTGT GCCAGGGCGC TGGCGACATC GGTGGTCTCG CACCGCAGTT ACTCAAGAGC CCGCTGTTCG CCGGTGCCAA AGTGGCCTCC ACCGAAGGGA AGCTGAAATG A
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Protein sequence | MVENQRAMPQ PEMRRIRRIH FVGIGGVGMC GIAEVLLNLG YEVSGSDLKG SAVTERLESF GAQIFIGHRA ENTIGADVLV VSSAVNTSNP EVATALERRI PVVPRAEMLA ELMRYRHGIA VAGTHGKTTT TSLIASVFAA GGLDPTFVIG GRLNAAGTNA QLGTSRYLIA EADESDASFL HLQPLVAVVT NIDADHMATY EGDFNKLKKT FVEFLHNLPF YGLAVMCIDD PVVREILPLV KRPTLTYGFS ESADIRAINV RQDGMLTFFT VLRRDREPLD VSVNMPGNHN VLNSLATIAI ATDEGVSDEA IVQGLSGFQG VGRRFQVYGE LPVDGGHVML VDDYGHHPRE VAAVINAVRG GWPDRRLVMV YQPHRFSRTR DLYDDFVQVL ADANVLLLME VYPAGEEPIP GADSRNLCHS IRQSGQLDPI YIERGVELAP LVKPLLRAGD ILLCQGAGDI GGLAPQLLKS PLFAGAKVAS TEGKLK
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