Gene Psyr_4049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4049 
Symbol 
ID3369585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4832581 
End bp4833375 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content64% 
IMG OID637654407 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_237117 
Protein GI66047276 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGT TGCGCGGCTA TGCCCGCGTA GTCCGGGTGC TACTGGTCGT AGCGCTCGGA 
TTGACGATTG CCAGCGCGTT CGCGGTCCTG GAACGTACCA GAATCGGAGG TTCGATGGAG
CGCAGACAGC GCTGGAGCCG CTGGTTCATG GCGCGACTGA CCAACGCCCT GCCGTTTCGC
GTCACCGTGA CAGGTCAACT GCCGACCCAG CCCATGCTGT GGGTCAGCAA TCATGTGTCA
TGGACCGACA TCGCCCTGCT CGGCATGCTC GCGCCGCTGT CGTTTCTGTC GAAGGCCGAA
GTACGCACCT GGCCGGTAGC GGGCTGGCTG GCGCTGAAGG CCGGTACGCT GTTCATTCGT
CGCGGATCGG GCGACAGCCG TCTGATCCAG AAGCAGATGT GCAACCACCT GCAACAAGGC
AACGCACTGC TGATCTTCCC CGAAGGCACC ACCACGGACG GCAAAAGCCT GCGCACCTTT
CACGGTCGTC TGCTGTCCAG CGCCATCGAC GCTGGCGTGC CGATTCAGCC GGTGGCCATT
GGTTACTCGC GTGACGGCAA ACCGGACCCG ATAGCCCCGT TCATTGGCGA CGATGACCTG
CTGTCGCATT TGCGCCGACT GTTCGCCAAC GAGCAGAGCG ACGTGCATAT TCACTTGCTG
ACACCGATCC CGACCGCTGA CCAGGAACGT GCCGCACTGG CCTTCAAGGC CCAGCAGGCG
GTTCAAGTGG CGTTGTTTGG CGAGCCGCAG GCTCAGCCGA GCGAAGTGGT TTCGCGGCCG
GCCCGAGCGG CCTGA
 
Protein sequence
MSRLRGYARV VRVLLVVALG LTIASAFAVL ERTRIGGSME RRQRWSRWFM ARLTNALPFR 
VTVTGQLPTQ PMLWVSNHVS WTDIALLGML APLSFLSKAE VRTWPVAGWL ALKAGTLFIR
RGSGDSRLIQ KQMCNHLQQG NALLIFPEGT TTDGKSLRTF HGRLLSSAID AGVPIQPVAI
GYSRDGKPDP IAPFIGDDDL LSHLRRLFAN EQSDVHIHLL TPIPTADQER AALAFKAQQA
VQVALFGEPQ AQPSEVVSRP ARAA