| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4031 |
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| Symbol | |
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| ID | 3369567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4799474 |
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| End bp | 4800997 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637654389 |
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| Product | Fe-S type hydro-lyase tartrate/fumarate alpha region:Fe-S type hydro-lyase tartrate/fumarate beta region |
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| Protein accession | YP_237099 |
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| Protein GI | 66047258 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00228691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCGTGA TCAAGCAAGA CGACCTGATT CAGAGCGTTG CAGACGCACT GCAGTTCATT
TCCTATTACC ACCCCGTGGA CTTCATCCAG GCCATGCACG AGGCGTATCT GCGTGAAGAG
TCGCCTGCCG CTCGTGACTC CATCGCCCAG ATCCTGATCA ACTCGCGCAT GTGCGCGACC
GGTCATCGCC CGATCTGCCA GGACACCGGC ATCGTCACGG TTTTCGTGCG CGTGGGGATG
GATGTTCGCT GGGACGGCGC CACCATGGGC CTGGACGACA TGATCAACGA AGGCGTGCGT
CGCGCGTACA ACCTGCCTGA AAACGTGCTG CGTGCCTCGA TCCTTGCCGA TCCGGCAGGC
GCTCGCAAAA ACACCAAGGA CAACACCCCG GCCGTCATTC ACTACTCCAT CGTCCCGGGT
AACACCGTGG AAGTGGACGT CGCGGCGAAA GGCGGCGGTT CGGAAAACAA ATCGAAGATG
GCGATGCTCA ACCCGTCCGA TTCGATCGTC GACTGGGTTC TGAAAACCGT ACCGACCATG
GGCGCAGGCT GGTGCCCGCC GGGCATGCTC GGCATCGGCA TCGGCGGTAC GGCTGAAAAA
GCCGCCGTTA TGGCCAAGGA AGTGTTGATG GAGTCCATCG ACATTCATGA ACTTAAAGCC
CGCGGCCCGC AGAATCGTAT CGAAGAGATG CGTCTGGAGC TGTTCGAGAA GGTCAACCAG
CTGGGCATTG GCGCTCAGGG CCTGGGCGGT CTGACCACCG TGCTCGACGT CAAGATCATG
GATTACCCGA CCCACGCCGC GTCGCTGCCG GTGTGCATGA TCCCCAATTG CGCCGCCACC
CGCCACGCGC ACTTCGTGCT CGACGGCAGC GGCCCTGCTT CGCTGGAGGC GCCATCGCTG
GACGCCTACC CGGAAATCGT CTGGGAAGCC GGCCCATCGG CCCGCCGCGT CAACCTCGAT
ACGCTGACCC CGGAAGAAGT ACAAAGCTGG AAACCGGGCG AAACCGTTTT GCTCAATGGC
AAGATGCTCA CCGGCCGCGA CGCGGCGCAC AAGCGCATGG TCGAAATGCT CAACCGGGGT
GAAACCCTGC CGGTAGACCT CAAGGGTCGC TTCATCTACT ACGTCGGCCC GGTTGATCCG
GTGCGCGAAG AAGTCGTCGG CCCGGCCGGC CCGACCACGG CCACCCGGAT GGACAAGTTC
ACCCGGCAGA TCCTCGACCA GACCGGCCTG CTGGGCATGA TCGGCAAATC CGAACGCGGC
CCGACCGCCA TCGAAGCGAT CCGTGACCAC AAGGCCGTGT ACCTGATGGC CGTCGGTGGT
GCTGCCTATT TGGTGGCTCA GGCGATCAAG AAATCCCGCG TCGTGGCCTT CGCCGAGCTG
GGCATGGAAG CGATCTACGA GTTCGAGGTC AAGGACATGC CGGTGACCGT GGCCGTAGAC
AGCAACGGTG AGTCCGTACA CATCACCGGC CCGCAGATCT GGCAGAAGAA GATCAGCGAC
AGTCTGGCGG TGGAAGTGCA GTAA
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| Protein sequence | MTVIKQDDLI QSVADALQFI SYYHPVDFIQ AMHEAYLREE SPAARDSIAQ ILINSRMCAT
GHRPICQDTG IVTVFVRVGM DVRWDGATMG LDDMINEGVR RAYNLPENVL RASILADPAG
ARKNTKDNTP AVIHYSIVPG NTVEVDVAAK GGGSENKSKM AMLNPSDSIV DWVLKTVPTM
GAGWCPPGML GIGIGGTAEK AAVMAKEVLM ESIDIHELKA RGPQNRIEEM RLELFEKVNQ
LGIGAQGLGG LTTVLDVKIM DYPTHAASLP VCMIPNCAAT RHAHFVLDGS GPASLEAPSL
DAYPEIVWEA GPSARRVNLD TLTPEEVQSW KPGETVLLNG KMLTGRDAAH KRMVEMLNRG
ETLPVDLKGR FIYYVGPVDP VREEVVGPAG PTTATRMDKF TRQILDQTGL LGMIGKSERG
PTAIEAIRDH KAVYLMAVGG AAYLVAQAIK KSRVVAFAEL GMEAIYEFEV KDMPVTVAVD
SNGESVHITG PQIWQKKISD SLAVEVQ
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