| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4018 |
|---|
| Symbol | purU |
|---|
| ID | 3369554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4785483 |
|---|
| End bp | 4786334 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637654376 |
|---|
| Product | formyltetrahydrofolate deformylase |
|---|
| Protein accession | YP_237086 |
|---|
| Protein GI | 66047245 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
|---|
| TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0329939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0297352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACTT TTCGTCTGGT GATTGCTTGC CCGGACCGTG TAGGCATCGT TGCCAAAGTC
AGTAACTTTC TGGCGTCCCA TAACGGCTGG ATCACCGAAG CGAGTCATCA CTCGGACAAT
CTCAGCGGCT GGTTTTTCAT GCGTCACGAG ATCCGTGCCG ACACCCTGCC TTTTGATCTG
GACGGGTTCC GTGAAGCCTT CACGCCGATT GCCGAAGAAT TTTCGATGGA CTGGCGCATT
ACCGACTCGG CGCAGAAGAA GCGCGTCGTG CTCATGGCCA GTCGCGAATC ACACTGTCTG
GCCGACCTGC TGCACCGCTG GCACAGTGAC GAACTCGACT GCGACATCGC CTGTGTGATT
TCAAACCACC AGGACCTGCG CAGCATGGTC GAGTGGCATG ACATCCCTTA CTACCATGTT
CCGGTTGACC CGAAAGACAA GGAGCCGGCA TTCGCCGAGG TGTCGCGTCT GGTCGGTCAT
CATCAGGCCG ACGTCGTGGT TCTGGCGCGC TACATGCAGA TTCTGCCGCC ACAGTTGTGC
CGTGAATATG CCCATCAGGT CATCAATATC CACCACAGCT TCCTGCCATC GTTCGTGGGT
GCCAAGCCGT ACCATCAGGC CTCGTTGCGC GGCGTCAAGC TGATCGGCGC GACCTGTCAC
TATGTGACCG AAGAGCTCGA TGCCGGTCCG ATCATCGAGC AGGACGTCGT GCGCGTCAGC
CACCGTGACA GCATCGAAAA CATGGTGCGT TTCGGCCGCG ACGTGGAGAA GATGGTGTTG
GCCCGCGGCT TGCGCGCTCA TCTGGAAGAC CGTGTGCTGG TTCACGACAA CAAGACAGTC
GTCTTCGGCT GA
|
|---|
| Protein sequence | MRTFRLVIAC PDRVGIVAKV SNFLASHNGW ITEASHHSDN LSGWFFMRHE IRADTLPFDL
DGFREAFTPI AEEFSMDWRI TDSAQKKRVV LMASRESHCL ADLLHRWHSD ELDCDIACVI
SNHQDLRSMV EWHDIPYYHV PVDPKDKEPA FAEVSRLVGH HQADVVVLAR YMQILPPQLC
REYAHQVINI HHSFLPSFVG AKPYHQASLR GVKLIGATCH YVTEELDAGP IIEQDVVRVS
HRDSIENMVR FGRDVEKMVL ARGLRAHLED RVLVHDNKTV VFG
|
|---|
| |