| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4004 |
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| Symbol | |
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| ID | 3369540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4767044 |
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| End bp | 4768540 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637654362 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_237072 |
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| Protein GI | 66047231 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.074494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCAGTC TTAATCAAAC GCCTCCGGCC ATCCGCAGCA TCCTGTTTGC GTTGATGATG
GCAGTCCTGC TCAGCGCGCT GGACCAAACC ATCGTCGCGG TCTCGATGCC CGCCATCTCT
GCCCAGTTCA GAGACATCGA TCTACTGGCC TGGGTCATAT CCGCCTACAT GGTGTCGCTG
ACCGTGGCCG TGCCGATCTA CGGCAAACTC GGCGATCTTT ACGGGCGCCG TAAACTGATG
CTGTTCGGGC TGGGGATTTT TACCCTGGCG TCGCTGTTCT GTGGCCTGGC GCAGAGCATG
GAACAACTGG TCCTGGCGCG CGTCCTGCAA GGCATCGGCG CGGGCGGGAT GGTTTCGGTC
AGCCAGGCGA TCATCGCCGA CATCGTTCCA CCTCGCGAAC GTGGCCGCTA TCAGGGTTAT
TTCAGCAGCA TGTACGCCGT GGCCAGCGTC GCCGGGCCGG TGCTTGGCGG CCTGATGACT
GAATACCTGT CCTGGCGCTG GGTGTTCCTG ATCAATCTGC CATTGGGGGC CGCTGCGCTG
ATCGTCGCGT ATCGGACCCT GGTTGGCCTG CCGGTGCCGC AGCGCAAGCC GATCATCGAT
TACCTGGGTA CCGTGCTGAT GATCATCGGC CTGACAGCGC TGCTGTTGGG GATTACCGAA
ATTGGCCAGG GTCATGGCCT GGGCGATGCC GAGGTTCAGT TGTTACTGGG CACGGCCCTG
CTGACGCTGG CCATTTTCGT CTGGTACGAA CGTCGCACTG CCGAACCGTT GCTGCCCATG
CATCTGTTCA CCAACAAGAG CGCCGTGCTG TGCTGGTGCA CCGTGTTCTT CACCAGTTTT
CAGGCCATCT CCCTGATTGT CCTGATGCCG CTGCGTTACC AGACCGTTAC CGGGGGCGGC
GCAGACAGCG CCGCCCTGCA CTTGCTTCCA CTGGCGATTG GCATGCCGAT GGGCGCCTAT
TTTGCCGGGC GACGCACCGC TCATACCGGG CGCTACAAGC CGCTGATCCT GACCGGTGCG
CTGTTGATGC CGGTTGCGAT TCTGGGCATG GCCTTCACGC CGCCGCAATC GCTGATAGTG
ATGAGCCTGT TCATGGTCCT CACCGGTGTT GCGACCGGCA TGCAGTTCCC CACGTCATTG
GTCGGCACTC AGAATTCGGT TCAGCCCCGG GATATGGGCG TGGCGACCAG CACGACCAAT
CTGTTCCGCT CACTGGGTGG TGCAGTGGGC GTGGCACTGA TGTCGGCGCT GCTGTTGGCC
ATGTTGCAGC ACACCGGGGT CGGCCAACTC GGCGCAGGAG CGCTGGGTAG CGAAGGCAGC
TCCGGCAACG TCCTGCTCGA CAGTCTGAAC GCGGCAACCG GCCCCGCGCT GGAAACCCTG
CGCACCGAAC TGGCAGTGAC CTTCAGAAAC CTGCTGATCA CCAGCGCGGC CATTTCGCTG
CTCGGTCTTG CGGCAGCCGC AGTGATGCCC AATACATTAT TGCGAGGACG GGACTGA
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| Protein sequence | MTSLNQTPPA IRSILFALMM AVLLSALDQT IVAVSMPAIS AQFRDIDLLA WVISAYMVSL
TVAVPIYGKL GDLYGRRKLM LFGLGIFTLA SLFCGLAQSM EQLVLARVLQ GIGAGGMVSV
SQAIIADIVP PRERGRYQGY FSSMYAVASV AGPVLGGLMT EYLSWRWVFL INLPLGAAAL
IVAYRTLVGL PVPQRKPIID YLGTVLMIIG LTALLLGITE IGQGHGLGDA EVQLLLGTAL
LTLAIFVWYE RRTAEPLLPM HLFTNKSAVL CWCTVFFTSF QAISLIVLMP LRYQTVTGGG
ADSAALHLLP LAIGMPMGAY FAGRRTAHTG RYKPLILTGA LLMPVAILGM AFTPPQSLIV
MSLFMVLTGV ATGMQFPTSL VGTQNSVQPR DMGVATSTTN LFRSLGGAVG VALMSALLLA
MLQHTGVGQL GAGALGSEGS SGNVLLDSLN AATGPALETL RTELAVTFRN LLITSAAISL
LGLAAAAVMP NTLLRGRD
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