Gene Psyr_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4002 
Symbol 
ID3369538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4765718 
End bp4766341 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content61% 
IMG OID637654360 
Producthypothetical protein 
Protein accessionYP_237070 
Protein GI66047229 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.548606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.130195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACG CTATTCACTC CTACGAGCCA TCCAAGGGTC ACGGCCTGCC GCACGACCCG 
TTCAACGCGA TTGTAGGCCC ACGCCCGATT GGCTGGATTT CGTCGCAGGA TGCCAACGGC
AAACTCAACC TGGCACCTTA CAGCTTCTTC AATGCGTTCA ACTACGTGCC GCCGATTATC
GGGTTCTGCA GCGTGGGCCG CAAAGACAGC CTCAATAATA TCGAGCAGAC CGGCGAGTTC
GTCTGGAACC TGGCGACCCG CTCGCTGGCC GAAGCCATGA ACCAGAGCTG CGCACCGGTG
GCGCCGGACG TCAGCGAATT CGAACTGGCA AACCTGACAC CACTGGCCTC GCAGATCGTC
TCGGTGCCGC GTGTACTCGA AACGCCAGTG TCGTTCGAGT GCAAGGTCAC GCAGATCATT
CAATTGCAAC GCGCCGACAA GGAACTGGTG CCCAGCTGGT TGATTCTCGG CGAGGTGGTG
GCGGTGCACA TCGACAAGTC GCTGCTCAAG GACGGCGTTT ACGATACCGC CGCCGCCGAG
CCGATTCTGC GCGGCGGCGG CCCGGCGGAT TACTTCCAGC TCGGCCCGGA AGCGCTGTTC
AAGATGTTCC GCCCAGGCGC CTGA
 
Protein sequence
MSDAIHSYEP SKGHGLPHDP FNAIVGPRPI GWISSQDANG KLNLAPYSFF NAFNYVPPII 
GFCSVGRKDS LNNIEQTGEF VWNLATRSLA EAMNQSCAPV APDVSEFELA NLTPLASQIV
SVPRVLETPV SFECKVTQII QLQRADKELV PSWLILGEVV AVHIDKSLLK DGVYDTAAAE
PILRGGGPAD YFQLGPEALF KMFRPGA