| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3996 |
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| Symbol | |
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| ID | 3369532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4757326 |
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| End bp | 4759716 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637654354 |
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| Product | PAS |
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| Protein accession | YP_237064 |
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| Protein GI | 66047223 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0784] FOG: CheY-like receiver
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.447634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.187563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCGGT TTATCCGAGA GACGGACTGG TCGACGTCCG CGCTGGGACC TAAGCAAGCA
TGGCCCGCAG CGCTACTGTC TTCAATGAAT CTGATGCTCA GTTGCCCTGA CAGCATGTAC
CTGCTCTGGG GCCCGGACTA CACCCTGTTT TTCAATGACG CTTACGCTCA GGTCCTGCCC
ATCGCGGCAG CACAGGCGCA GGGGCAGCCC ATTGCCTCGG TCTGGGGCGA TGCCTGGGAA
GCCGTGCGGC CGCTCGCCGA GCAGGCGCTG GCCGGACAAA ACCGCCGCTC CGACAATATT
CAGCGCACCA TCGTGCGCAA TGGCAAGCCC GAGCAGACCT GGTGGTCGCT GTCCTACTCG
CCGCTGTATG GCGATAGCGG CCTGATCGAG GGCGTGTTCT GCCGTGTCAA CGAGACCACC
TTGCAGGTCA TGGCTGAAGC ACGTCAGTCG GAAAACGAAG CGTTCACGGA CCGTGTGCTG
TCGAGCATCA ACGACTGCAT CAAGGTGCTG GACCTGGACT CGCGCCTGAC CTTCATGAGT
GAGGGCGGTC AGCGGATCAT GGAGGTCAGC GATTTCAACG CGATTCGCGG CTGCCCCTGG
CCTGACTTCT GGCAGGAACA GGGCAATCTG GACGCCATCG CGGCAGTCGA AGCGGCCAGA
GCGGGTCAGA ACGCCAGTTT TACGGGCTCG GCGAGAACCC TGGCCGGCAC CACCAAGTGG
TGGCACGTGC AGGTCAGCCC GATTTTCGGC AAGGATGGCA AACCGGAGAA GATCCTCTGT
GTGTCCAGGG ACATGACCCA GCTCAGAGAC GCTGAAGAAG CCCTGCTGTC GCTCAACGAG
ACGCTCGAGC AGCGCGTGGT CGAACGCACC CAGGACCGTG ATCGCATCTG GCGGCTATCG
ACCGACCTGA TGCTGGTGGC GCAGTTCGAC GGGATCATCT CGGCAGTCAA TCCGGCATGG
ACGCAAGCCC TCGGCTGGTC GGAAGAACAA CTGCTCGACA GCCAGTTTCT GGCACTGGTG
CACCCTGAGG ACGTGGACAG TACGCTGGCC GCCATGAGCG GGCTGGAGAA CGGCCGCACC
ATCCCGCACT TCAAGAATCG CTATCGCCAT CAGGACGGCT CGTACCGGAC CATCTCCTGG
ACGGCCGTGC CGGACAAGCA ATTCATCCAT GCCGTCGGCC GTGACATTCA GGCCGAGGAA
GAGGCCAATG AAGCGCTGCG GCTTTCACAG GACGCCCTGC ATCAGGCGCA GAAGCTGGAA
GCCATTGGCC AACTTACCGG CGGCGTAGCG CATGACTTCA ATAATCTGTT GACGGTGATC
CGCTCCTGCA GCGACCTGCT GAAGTCGCCA AACCTCGAAG AGCATCGTCG CGTCAAATAC
GTCGAAGCCA TTTCCAGCAC GGTGGACCGG GCCGCGCGCC TGACCGGACA GTTGCTGGCG
TTTGCCCGCC GTCAGGCCTT GCAGCCGGAA GTGTTCGATG TGTGCAAAAG CGTGGCGCGC
ATTGGCGAGA TGATGGACAC GCTGACCGGC GCGCGGATTC AGGTCAGCAT CGACCTGCCT
GCCGAGCCGT GCTTCATCTT CGCCGATGGC AGCCAGTTCG ATACTGCGCT GGTCAACATG
GTGGTCAACG CCCGCGATGC GATGTCCGGC GCGGGGCGGC TGGTCATCAA GGTTGAATGC
GCTGCCTGTC CTGCCGACGA TCAACCCGCT TCACTCGGCG AGGGTGACTA TATAGAGGGT
GACTATGTAA GGGTATCGCT GACCGATACC GGCGCCGGTA TTGCCAAGGA GAAGCTGGGG
CTGATCTTCG AACCGTTCTA TACCACCAAG AGTGTCGGCC AGGGCACCGG GCTGGGGTTG
TCGCAGGTAT TCGGTTTTGC CAAACAGTCG GGTGGTGAAG TGCTGGTTGA AAGCGAGCTG
GGCAAAGGCA GCCGCTTCAC GCTGTGCCTG CCCAGCGCAC AGAATCACGA AGTCGTCCAG
GAAGACCATC GCCACACCCT CACCCCATTG CCCGGGCTGT GCGTGCTGAT GGTCGAGGAC
AATCAGGACA TCGGCACCTA TACCCGCCCC ATGCTTGAGC AACTGGGCTT TCAGGTGCTC
TGGGTAAGCA GTGCCGCCGA AGCGCTGAAA GAGCTTTCCG GCAACCCGGA AAACTTCCAT
GTGGTGTTCT CGGATATCGC AATGCCGGGC ATGAGCGGCC TGGAACTGTA CGCCGAAATC
GAAGCGCGCT ATCCGTGGAT GCCGGTGGTT CTTACCACCG GGTACAGCAC GGAGTTCGCG
ACGATCGCCC AAGACGAAAC ACAGCGCTTC GACCTGTTGC AGAAACCCTA CTCCAGAGAC
GATCTGGCGG CGATTCTGCA CAAGGCGGTG AGTCGTAGCG GCGAACACTG A
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| Protein sequence | MGRFIRETDW STSALGPKQA WPAALLSSMN LMLSCPDSMY LLWGPDYTLF FNDAYAQVLP
IAAAQAQGQP IASVWGDAWE AVRPLAEQAL AGQNRRSDNI QRTIVRNGKP EQTWWSLSYS
PLYGDSGLIE GVFCRVNETT LQVMAEARQS ENEAFTDRVL SSINDCIKVL DLDSRLTFMS
EGGQRIMEVS DFNAIRGCPW PDFWQEQGNL DAIAAVEAAR AGQNASFTGS ARTLAGTTKW
WHVQVSPIFG KDGKPEKILC VSRDMTQLRD AEEALLSLNE TLEQRVVERT QDRDRIWRLS
TDLMLVAQFD GIISAVNPAW TQALGWSEEQ LLDSQFLALV HPEDVDSTLA AMSGLENGRT
IPHFKNRYRH QDGSYRTISW TAVPDKQFIH AVGRDIQAEE EANEALRLSQ DALHQAQKLE
AIGQLTGGVA HDFNNLLTVI RSCSDLLKSP NLEEHRRVKY VEAISSTVDR AARLTGQLLA
FARRQALQPE VFDVCKSVAR IGEMMDTLTG ARIQVSIDLP AEPCFIFADG SQFDTALVNM
VVNARDAMSG AGRLVIKVEC AACPADDQPA SLGEGDYIEG DYVRVSLTDT GAGIAKEKLG
LIFEPFYTTK SVGQGTGLGL SQVFGFAKQS GGEVLVESEL GKGSRFTLCL PSAQNHEVVQ
EDHRHTLTPL PGLCVLMVED NQDIGTYTRP MLEQLGFQVL WVSSAAEALK ELSGNPENFH
VVFSDIAMPG MSGLELYAEI EARYPWMPVV LTTGYSTEFA TIAQDETQRF DLLQKPYSRD
DLAAILHKAV SRSGEH
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