Gene Psyr_3987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3987 
Symbol 
ID3369523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4744868 
End bp4746016 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content60% 
IMG OID637654345 
ProductIron-containing alcohol dehydrogenase 
Protein accessionYP_237055 
Protein GI66047214 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.958814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCA CTTTTTTCAT CCCCGCTGTG AACATCATCG GCACTGGCTG CATTGACGAA 
GCCATGCTCG CCATACGCAA ATACGGATTT CGCAAGGCCC TGATCGTCAC GGATGCTGGC
CTTGCCAGGG CCGGAGTAGC CAGTCAGGTC GCCGGGCTGT TGGTGGAGCA GGGCATTGAC
TCGGTTGTGT ACGACGGTGC CCGGCCCAAC CCGACCATCG CCAACGTCGA GAACGGCCTG
GCCCTGTTGC AGGAGCGCCA GTGCGATTTC GTCATATCGC TGGGCGGTGG CTCGCCTCAC
GACTGTGCAA AAGGTATTGC CCTGTGCGCC AGCAACGGGG GGCATATCAG CGATTATGAG
GGCGTCGACC GTTCGGCAAA ACCGCAGTTG CCATTGATTG CCATCAATAC CACCGCCGGA
ACCGCGAGTG AAATGACCCG CTTCTGCATC ATTACCGACG AAGCCCGGCA CGTAAAAATG
GCGATCATCG ACCGCAACGT CACGCCGCTG CTGTCCGTGA ATGATCCCGA CATGATGGTC
GCCATGCCCA GGTCGCTGAC TGCCGCCACT GGCATGGATG CCTTGACTCA CGCAATCGAA
GCCTATGTCT CCACGGCTGC CAACCCGATC ACTGACGCCT GTGCGTTACA GGCTATGGCG
CTGATCGCCA ACAATTTGCG CGACGCATTC AACAACGGGG CCAATATCAC TGCCCGCGAG
AACATGGCGT ATGCCCAGTT TCTGGCTGGC ATGGCGTTCA ATAACGCGTC ACTGGGCTAC
GTGCACGCCA TGGCGCACCA GTTGGGCGGC TTTTATGATT TGCCCCACGG TGTGTGCAAC
GCCGTATTGC TGCCCCATGT GCAGCGCTTC AACGCCAGCG TCAGCGCTGC ACGCCTGACC
GACGTTGCAC ACGCCATGGG CAGCAATATC CGTGGGCTCT CTCCGGAAGA AGGCGCTCAG
GCAGCCATCG ACGCGATTCG TGCATTGTCG GCTGCCGTGG AAATCCCGGC AGGTCTTGCT
ACGCTGGGCG TCAAGGAGGA AGACTTCCCG ATGCTGGCCA GCAATGCCCT GAAAGATGCC
TGCGGCCTGA CCAACCCGCG TCCTGCCGAT CTTGAGCAGA TTCAGGATAT ATTTCGCCAG
GCGCTTTAA
 
Protein sequence
MISTFFIPAV NIIGTGCIDE AMLAIRKYGF RKALIVTDAG LARAGVASQV AGLLVEQGID 
SVVYDGARPN PTIANVENGL ALLQERQCDF VISLGGGSPH DCAKGIALCA SNGGHISDYE
GVDRSAKPQL PLIAINTTAG TASEMTRFCI ITDEARHVKM AIIDRNVTPL LSVNDPDMMV
AMPRSLTAAT GMDALTHAIE AYVSTAANPI TDACALQAMA LIANNLRDAF NNGANITARE
NMAYAQFLAG MAFNNASLGY VHAMAHQLGG FYDLPHGVCN AVLLPHVQRF NASVSAARLT
DVAHAMGSNI RGLSPEEGAQ AAIDAIRALS AAVEIPAGLA TLGVKEEDFP MLASNALKDA
CGLTNPRPAD LEQIQDIFRQ AL