Gene Psyr_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3966 
Symbol 
ID3369501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4713938 
End bp4714915 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content62% 
IMG OID637654323 
Producthypothetical protein 
Protein accessionYP_237034 
Protein GI66047193 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.846302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT CCCTGCGCCA TATAGCCGCC ACCGCTGGGT GCATGCTGAT TGCCAGCCAG 
TTGCTTGCCG AACCCAAACG TCCGGAATGC ATTGCCCCTG CCTCGCCCGG TGGCGGGTTC
GACCTGACCT GCAAACTGGT GCAGAGCGCA CTGATCAACG AGAAGATTCT GAACTCGCCG
ATGCGCGTCA CTTACATGCC AGGCGGTGTC GGCGCGGTGG CCTACAACGC AGTCGTCGCG
CAGCGCCCCG CCGATGCCGG CACACTGGTC GCGTGGTCCA GCGGTTCGCT GCTCAATCTG
GCACAGGGCA AATTCGGTCG TTTCGATGAA AACGCAGTGC GCTGGCTCGC CGCTGTGGGC
ACCAGCTATG GCGCCATCGC CGTGAAGAGC GACTCGCCCT ACAAGAACCT CGACGATCTG
GTCCAGGCGC TGAAGGCCGA CCCGAGCAAA GTCGTGATCG GCTCGGGCGG CACCGTGGGC
AGCCAGGACT GGATGCAGAC CGCGTTGATC GCCAAGGCCG CAGGCATCAA CCCGCGCGCC
CTGCGCTACG TGGCACTCGA AGGCGGCGGT GAAATCGCCA CCGCGTTGCT CGGCGGCCAC
ATCCAGGTGG GCAGTACCGA TATTTCCGAT TCCATGCCGC ACATTCTGAG CGGCGACATG
CGCCTGCTCG CGGTGTTCGC CGAGAAGCGT ATCGACGAAC CCGAAATGAA AGACATCCCT
ACCGCCAAGG AGCAGGGCTA CGACATCGTC TGGCCTGTAG TGCGTGGCTT CTACCTCGGG
CCAAAGGTCA GCGACGAAGA CTACAACTGG TGGAAAGCCT CGTTCGACAA GATCCTGGCC
TCCGAAGACT TCGCCAAACT GCGCGACCAG CGCGAGTTGT TCCCGTTCGC CATGAGCGGC
GCGGAACTGG ACACCTACGT CAAGAAGCAG GTTGCCGACT ACAAAGTGAT GGCCAAGGAA
TTCGGCCTGA TTCAGTGA
 
Protein sequence
MKFSLRHIAA TAGCMLIASQ LLAEPKRPEC IAPASPGGGF DLTCKLVQSA LINEKILNSP 
MRVTYMPGGV GAVAYNAVVA QRPADAGTLV AWSSGSLLNL AQGKFGRFDE NAVRWLAAVG
TSYGAIAVKS DSPYKNLDDL VQALKADPSK VVIGSGGTVG SQDWMQTALI AKAAGINPRA
LRYVALEGGG EIATALLGGH IQVGSTDISD SMPHILSGDM RLLAVFAEKR IDEPEMKDIP
TAKEQGYDIV WPVVRGFYLG PKVSDEDYNW WKASFDKILA SEDFAKLRDQ RELFPFAMSG
AELDTYVKKQ VADYKVMAKE FGLIQ