Gene Psyr_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3949 
SymbolrecO 
ID3369484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4697047 
End bp4697730 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content64% 
IMG OID637654306 
ProductDNA repair protein RecO 
Protein accessionYP_237017 
Protein GI66047176 
COG category[L] Replication, recombination and repair 
COG ID[COG1381] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00613] DNA repair protein RecO 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CCACCGGCCA ACCTGCTTAT GTGCTCCACA GTCGTGCGTA TCGCGAAAAC 
AGCGCGCTGG TCGACTTCCT CACGCCTCAG GGCCGTCTGC GTGCCGTGCT GCGCAGTGCC
AAGGGCAAGG CGGGTTCGCT GGCACGCCCG TTCGTGCCCC TCGAGGTCGA GTTTCGAGGG
CGGGGCGAGC TGAAGAATGT CGGCCGCATG GAAAGCGCGG GCGTCGCCAC CTGGATGACC
GGCGAGGCGC TGTTCAGCGG CATGTACCTC AACGAACTGC TGATTCGCCT GTTGCCTGCC
GAAGACCCTC ATCCTGCGGT GTTCGAACAT TACGCTGCCA CGCTGCTGGC CCTTGCTCTG
GGGCGTCCGC TGGAGCCGTT GCTGCGTTCG TTCGAATGGC GGTTGCTGGA TGACCTGGGC
TATGGCTTCG CGATGGACGC CGACATCAAC GGCGAACCGC TGGCCATTGA TGGCATGTAT
CGCCTGCAGG TCGATGCCGG GCTCGAGCGT GTGTACCTGC TTCAGCCCGG TCTGTTTCAG
GGCGCGGAAT TACTGGCCAT GTCCGAAGCC GACTGGAGCG TCCCGGGCGC GTTGTCCGCT
GCCAAGCGCC TGATGCGTCA GGCGCTGGCA GTTCACTTGG GCGGTCGCCC TTTAGTCAGT
CGTGAACTGT TTCGCAAGCC TTGA
 
Protein sequence
MSTPTGQPAY VLHSRAYREN SALVDFLTPQ GRLRAVLRSA KGKAGSLARP FVPLEVEFRG 
RGELKNVGRM ESAGVATWMT GEALFSGMYL NELLIRLLPA EDPHPAVFEH YAATLLALAL
GRPLEPLLRS FEWRLLDDLG YGFAMDADIN GEPLAIDGMY RLQVDAGLER VYLLQPGLFQ
GAELLAMSEA DWSVPGALSA AKRLMRQALA VHLGGRPLVS RELFRKP