Gene Psyr_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3948 
Symbol 
ID3369483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4696247 
End bp4696987 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content64% 
IMG OID637654305 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_237016 
Protein GI66047175 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCACA GCACTCGTAT CCTTCTCGGC GTGAACATCG ACCACGTAGC CACCTTGCGT 
CAGGCCCGTG GCACGCGCTA CCCGGACCCG GTAAAGGCTG CCCTGGATGC CGAAGAGGCA
GGCGCCGACG GCATCACCGT CCACCTGCGT GAGGACCGCC GACACATTCA GGAGCGCGAT
GTCCTGCTGC TCAAGGATGT CTTGCAGACC CGCATGAATT TCGAGATGGG CGTCACCGAA
GACATGCTCG CCTTCGCCGA ACGCATTCGT CCGGCGCACA TCTGCCTGGT GCCTGAGACA
CGGCAGGAGC TGACCACCGA AGGCGGTCTG GACGTGGCGG GGCAGGAAGC GCGGATCAAG
GCGGCGGTCG AGCGACTGGC GAAGATTGGC TGCGAAGTTT CGCTGTTCAT CGACGCCGAC
GAGCGTCAGA TCGCCGCTTC AAAGCGCGTC GGCGCCCCCG CCATCGAACT GCATACCGGT
CGCTATGCCG ACGCTCAGAC CCCGACCGAA GTCGCCGAAG AACTGCAGCG GGTCGCCGAT
GGCGTAGCGT TTGGTCTCGC CCAGGGGCTG GTCGTCAATG CCGGTCACGG CCTGCATTAT
CACAACGTCG AAGCCGTCGC CGCGATCAAG GGCATCAACG AACTGAACAT CGGCCACGCG
CTGGTGGCTC ATGCTCTGTT CGTCGGCTTC AAGGCGGCAG TGGCCGAGAT GAAGGCGTTG
ATCGTGGCGG CAGCCAGATA A
 
Protein sequence
MTHSTRILLG VNIDHVATLR QARGTRYPDP VKAALDAEEA GADGITVHLR EDRRHIQERD 
VLLLKDVLQT RMNFEMGVTE DMLAFAERIR PAHICLVPET RQELTTEGGL DVAGQEARIK
AAVERLAKIG CEVSLFIDAD ERQIAASKRV GAPAIELHTG RYADAQTPTE VAEELQRVAD
GVAFGLAQGL VVNAGHGLHY HNVEAVAAIK GINELNIGHA LVAHALFVGF KAAVAEMKAL
IVAAAR