| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3895 |
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| Symbol | |
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| ID | 3369430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4636903 |
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| End bp | 4637580 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637654252 |
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| Product | ribonuclease T |
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| Protein accession | YP_236963 |
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| Protein GI | 66047122 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.525441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTGAAG ATCATTTTGA CGACGAACAC GAAGGCCACG GCGGTGGCGG CGGTTCCCGT
CACCCGATGG CGGCGCGCTT TCGCGGCTAC CTGCCAGTGG TCGTCGACGT AGAAACCGGC
GGCTTCAATT CAGCCACCGA TGCCTTGCTG GAAATCGCTG CGGTGACGAT CGGCATGGAT
GAAAAAGGCT TCGTGTTCCC GGAACACACC TATTTCTTCC GCGTAGAACC GTTCGAGGGT
GCCAACATCG AAGCGGCGGC GCTGGAGTTC ACCGGCATCA AGCTCGATCA TCCGCTGCGC
ATGGCGGTCA GCGAAGAAAC CGCGATGAAC GACATCTTCC GCGGTGTGCG CAAGGCCCTC
AAGGCCAATG GCTGCAAACG CGCGGTGCTG GTCGGCCACA ACGCCAGCTT CGACCTCGGC
TTCGTCAATG CCGCCGTCGC ACGGATGGAC ATGAAGCGCA ATCCGTTTCA CCCGTTCTCC
AGCTTCGACA CCGCCACCCT CGCCGGCCTG GCCTATGGTC AGACCGTGCT GGCAAAGGCC
TGTCAGGCGG CAGGCATCGA CTTCGACGGA CGCGAGGCGC ACTCGGCCCG TTACGACACC
GAGAAGACCG CCGAGCTGTT CTGCGGCATC GTCAATCGCT GGAAAGAAAT GGGCGGTTGG
CAAGATTTCG ACGACTGA
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| Protein sequence | MSEDHFDDEH EGHGGGGGSR HPMAARFRGY LPVVVDVETG GFNSATDALL EIAAVTIGMD
EKGFVFPEHT YFFRVEPFEG ANIEAAALEF TGIKLDHPLR MAVSEETAMN DIFRGVRKAL
KANGCKRAVL VGHNASFDLG FVNAAVARMD MKRNPFHPFS SFDTATLAGL AYGQTVLAKA
CQAAGIDFDG REAHSARYDT EKTAELFCGI VNRWKEMGGW QDFDD
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