Gene Psyr_3881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3881 
Symbol 
ID3369416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4622955 
End bp4623611 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content63% 
IMG OID637654238 
Producthypothetical protein 
Protein accessionYP_236949 
Protein GI66047108 
COG category[R] General function prediction only 
COG ID[COG1407] Predicted ICC-like phosphoesterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.65628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.50088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGT ATCTTGCTGT CACGCTGGCA GGAGAAGAAC TGTGGTTGCT GGCCGACAAG 
GCCATCTACT ACCCTGCCGA ACGATCCTTG CTGATTGCCG ACGCGCACTT TGGCAAGGCG
GCCGCCTATC GCAAGCTCGG CCAACCGGTG CCGCACGGCA CTACACAGGC GAATCTGCGC
CGCCTGGACA GCCTTCTGAA TGCCTATCCC TGCGATCATC TGATCTTTCT GGGCGATTTC
CTGCACGCGC CGGAGTCTCA CGCAGTCGGC ACCTTGGCAG CGCTGGAACA ATGGCGGGCA
GAGCGCTCGA CACTGCGCAT CACACTCATC CGCGGCAACC ACGACAAGCG GGCCGGCGAC
CCGCCTGCCT ACCTGGGCAT CGATGTGGTT CCCGAGCCCT TGGCGCTTGG GCCCTTTGCC
CTGCAGCACG AGCCCGATGC GCACCCTGAC CTGCATGTAC TGGCCGGGCA TGTTCATCCG
GTGTATCGGC TAAACGGTCG CGGTCGGCAA AGCTTGCGGC TGGCGTGCTT CTACCTGGGC
CAGCGCGTCA GCCTGCTGCC GGCCTTCGGT GAATTTACCG GCGGTTTTCA GATTCGCCCG
GCACCGGACA GCACGATCTA TGTGACCGGC GGTGATGCAG TGTGGCGAGT GGCATAG
 
Protein sequence
MTPYLAVTLA GEELWLLADK AIYYPAERSL LIADAHFGKA AAYRKLGQPV PHGTTQANLR 
RLDSLLNAYP CDHLIFLGDF LHAPESHAVG TLAALEQWRA ERSTLRITLI RGNHDKRAGD
PPAYLGIDVV PEPLALGPFA LQHEPDAHPD LHVLAGHVHP VYRLNGRGRQ SLRLACFYLG
QRVSLLPAFG EFTGGFQIRP APDSTIYVTG GDAVWRVA