Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3872 |
Symbol | |
ID | 3369407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4612321 |
End bp | 4613367 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637654229 |
Product | hypothetical protein |
Protein accession | YP_236940 |
Protein GI | 66047099 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.187912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTTG TCGTTGCGCG CCCCGAAGGT TTGTACTGCC CACCCGGTGA TTTCTATATC GATCCATGGC GTCCTGTCGA ACGCGCCGTC ATCACCCATG CGCATGGCGA TCATGCCCGC ACGGGCAACG AGCATTACCT GTCAGCCGCC AGTGGCGAGG GTATTCTGCG TTCTCGCCTT GGGCAGAACA TCAATCTGCA GACTCTGGAG TACGGCGAAA CCATCACCCA TCACGGGGTG AAACTGAGCC TGCATCCGGC CGGGCATGTA TTGGGGTCGG CGCAAGTGCG ACTGGAGTAC CAAGGCGAGG TCTGGGTTGC TTCCGGCGAT TACAAAGTCG AGCCGGACGG CACCTGTGCG GCCTTCGAAC CGGTGCGCTG CCATACCTTT ATCACCGAAT CGACCTTCGG CCTGCCGATC TATCGCTGGG CGCCGCAGGC GCAGATCTTC GAAGGCATCA ACCAGTGGTG GCGTGCCAAT GCAGCCCAGG GCAAGGCCAG CGTGTTGTTC GCCTACTCGT TCGGCAAGGC CCAGCGCATC CTCCACGGCA TTGACGCGCA GATCGGACCG ATTCTGGTCC ACGGCGCCGT CGAGCCGCTG AACCGCGTGT ATCGCGAGGG CGGCATCTAC ATCCCGGAAA CCCAATACGC CGGCGATTTC AAAAAGACCG ATCCCGCGCT GCGCCAGGCG TTGATCCTCG CCCCGCCTTC AGCGGGCGGC AGCAGCTGGA TGAAGCGCTT TGGCGAATAC AGCGATGCGT TTGCCAGCGG CTGGATGATG CTGCGCGGCA CACGACGCCG GCGCGGTGTG GACCGCGGTT TTGTGCTGTC CGATCACGCC GACTGGCCGG GCCTGCTGTG GGCTGTCGAA CAGACCGGTG CCGAACGCGT CATGGTGACC CACGGCTCGG TCGGCATACT GGTGCGTTAC CTGCGTGAAC TGGGTCTCGA CGCACAGGGC TTCAGCACCG AATACGGCGA TGAAGAAGAC AGCAACCCGG CAGCCGGCGA ACCCGAGGCG GCAGGCACGG GTGAGGCTCA GTCATGA
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Protein sequence | MDLVVARPEG LYCPPGDFYI DPWRPVERAV ITHAHGDHAR TGNEHYLSAA SGEGILRSRL GQNINLQTLE YGETITHHGV KLSLHPAGHV LGSAQVRLEY QGEVWVASGD YKVEPDGTCA AFEPVRCHTF ITESTFGLPI YRWAPQAQIF EGINQWWRAN AAQGKASVLF AYSFGKAQRI LHGIDAQIGP ILVHGAVEPL NRVYREGGIY IPETQYAGDF KKTDPALRQA LILAPPSAGG SSWMKRFGEY SDAFASGWMM LRGTRRRRGV DRGFVLSDHA DWPGLLWAVE QTGAERVMVT HGSVGILVRY LRELGLDAQG FSTEYGDEED SNPAAGEPEA AGTGEAQS
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