Gene Psyr_3869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3869 
Symbol 
ID3369404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4607928 
End bp4608584 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content61% 
IMG OID637654226 
Productpeptidase 
Protein accessionYP_236937 
Protein GI66047096 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAC AGGAACGTAT CGCCAGGGCA ATCGCCGCCA GTGGCTTGAA GAAAGGTGAA 
ATTGCCGCCC AGTGCGGCGT GGCCAACTCT GCCGTTACCC AATGGATCAG CGGGGAAAGC
AAAAGCCTGC GGCCGGAAAA CCTTTACGCA CTGGCGCGGG CCACGGGCTT TCGTGCCGAA
TGGCTGGCGA TTGGCGAGGG ACCGGAAAAA GCGCCTGCCT TCGACGCCAA CGTTGCGCTG
ATCGATCAGC CGGACATGTC TTTCCGTTAT CCGGTGATCA GCTGGGTGTC GGCAGGCTCC
TGGGAGGAAG CGGTTCAGCC TTACCCCGAC GGTTTTTCCG ACCGCTATGA AATCTCCGAC
TATGACTCCA AGGGGCCGGC GTTCTGGCTG GAGGTCAAGG GCGATTCGAT GACCGCGCCC
ACTGGCGTCA GTGTGCCGGA AGGGATGATG ATTCTGGTGG ACACGGAGGC CGATGTGCAG
CCCGGCAAGC TGGTGATCGC CAAGCTGCCC GCCAGCAACG AGGCGACGTT CAAGAAGCTG
GTCGAGGACG GCGGCACACG CTACCTGAAG CCCTTGAACC CGGCGTACAA AATGATCGAG
TGCGGTGCCG ACTGTCGCAT TATCGGCGTT GCGGTGAGGA TGACCGGCAA GCTGTAA
 
Protein sequence
MTRQERIARA IAASGLKKGE IAAQCGVANS AVTQWISGES KSLRPENLYA LARATGFRAE 
WLAIGEGPEK APAFDANVAL IDQPDMSFRY PVISWVSAGS WEEAVQPYPD GFSDRYEISD
YDSKGPAFWL EVKGDSMTAP TGVSVPEGMM ILVDTEADVQ PGKLVIAKLP ASNEATFKKL
VEDGGTRYLK PLNPAYKMIE CGADCRIIGV AVRMTGKL