Gene Psyr_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3856 
SymboldinG 
ID3369391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4595497 
End bp4597641 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content64% 
IMG OID637654213 
ProductATP-dependent DNA helicase DinG 
Protein accessionYP_236924 
Protein GI66047083 
COG category[L] Replication, recombination and repair
[K] Transcription 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.160495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.793215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGTA CCGAACTCAA AACCCAGATC CAGGGCGCTT ACTCGCGTTT CCTCGAAGCC 
AAGAGCCTCA AGCCACGCTA TGGCCAGCGA TTGATGATCG CTGAAGTCGC CAAGGTGCTG
GGGGACATTG ACACCGATGA AGAGGGCCGT CGTTCGGGCG ATCCTGCGGT AGTGGCCGTC
GAGGCCGGGA CGGGTACCGG CAAGACCGTG GCTTACGCCA TCGCCTCGAT CCCCACCGCC
AAGGCGGCAG GCAAGCGGCT GGTGATCGCC ACCGCGACCG TCGCCCTGCA GGAGCAGATC
GTCTACAAGG ACCTGCCGGA CCTGATGCGC AACAGCGGTC TGAATTTTAC CTTCGCCCTG
GCCAAGGGGC GCGGGCGTTA CATGTGCCTG TCCAAGCTCG ACGCATTGCT GCAGGAAAGT
GACGCGACCA ACGCGACCGC GCAACTGTTC GAGGAAGAAG GCTTCAAGAT CGAAGTCGAT
GAGGCCAGTC AGAAGCTTTT CACCAGCATG TTGCAGAAGC TGGCGGGCAA CAAGTGGGAC
GGCGATCGCG ACAGCTGGCC GCAGGAACTC GCCGATCAGG ACTGGGCGCG TCTGACCACC
GATCACAGCC AGTGCACCAA CCGGCACTGC CCCAACTTTC AGCAGTGCGC CTTCTATAAG
GCGCGTGAAG GCATGGGCAA GGTCGATGTG ATCGTCACCA ACCACGACAT GGTGCTGGCC
GACCTGGCAC TGGGCGGCGG TGCGGTGCTG CCGGACCCGC GTGACACCCT GTATGTCTTC
GACGAGGGGC ATCACCTGCC GGACAAGGCC ATCGGCCACT TTGCCCACTA CACCCGATTG
AAATCGACCG CCGACTGGCT GGAACAGACC GCCAAGAACC TCGCCAAGCT GCTGGCCCAG
CATCCGCTGC CCGGCGATCT GGGCAAGCTG ATCGAGCAGG TGCCGGAGCT GGCCCGCGAG
ATCAAGGGTC ATCAGCAGTT CATGTTCGGT GCCTGCGAGC AACTGGCGGA TTTCCGCGCC
GGTGAGGACA TGCAGGGCCG CGAGCGTCCA CGTCACCGCT TTGTCGGCGG CGTGATTCCC
GAGCACATTC GCGAGATGGG TATCGAGCTC AAGAAGGGCT TCGCGCGCCT CGACGACCTG
TTCACGCGCC TGACCGAGCT GCTCAAGGAA GGCATGGACG GTGAGGTCAA CATCGGCATC
GCCAGCCATC AGGCCGAAGA ATGGTATCCG CTGTTCGGCA GCCTGCTGGC TCGCGCGCAT
GGCAACTGGG AATTGTGGAC AGCCTTCACC GCCGAAGACC CGGAAGACAG CCCGCCAATG
GCGCGCTGGC TGACCTTGGC CGACAGCGGT GCAATGTTCG ATATCGAGGT CAATGCCAGC
CCGATCCTGG CGGCGGAAAT GCTGCGTCGC AACTTGTGGA ACATCGCCTA CGGAGCGCTG
GTCACCTCGG CGACCCTGAC CGCGCTGGGC AAGTTCGACC GCTATCGCAT GCGCGCCGGC
CTGCCCAAGG GGGCGGTGAC CGCGGTGGTG CCAAGCCCGT TCCATCACGC TGATGCCGGC
GTGCTGCGCG TACCCGACCT CAAGGCCGAC CCGCGTGACT CGGTGGCGCA TACCGCCGCG
ATCATTCGCG ACCTGCCCGG TCTGGTGGAA GGTTCGCGGG GCACGCTGGT GCTGTATTCG
TCGCGCAAGC AGATGCAGGA TGTGTTCGAC GGCCTGGACC GTGACTGGCG CAAGCAGGTG
TTCATTCAGG GCAACCTGTC CAAACAGGAA ACCCTCAACA AGCACAAGGC ACGCGTCGAC
AGCGGCGAGT CCAGCGTACT GTTCGGGCTG GCCAGCTTCG CCGAGGGTGT GGATTTGCCC
GGTGCCTACT GCGAACATGT GGTCATCGCC AAGATCCCGT TCGCGGTGCC GGATGACCCG
GTCGAGGCCG CGCTGGCCGA GTGGATCGAA GCGCGTGGCG GCAACCCGTT CATGGAGATC
GCCGTGCCCG ATGCCTCGTT GCGTCTGGTG CAGGCCTGTG GCCGCTTGCT GCGCACCGAA
GAGGACCGCG GCACCATCAC GCTGCTGGAC CGGCGGGTGG TCACCCAGCG CTATGGCAAG
GCGATTCTCA ATGCGCTGCC ACCGTTCCGC CGGGAAATAA CGTGA
 
Protein sequence
MISTELKTQI QGAYSRFLEA KSLKPRYGQR LMIAEVAKVL GDIDTDEEGR RSGDPAVVAV 
EAGTGTGKTV AYAIASIPTA KAAGKRLVIA TATVALQEQI VYKDLPDLMR NSGLNFTFAL
AKGRGRYMCL SKLDALLQES DATNATAQLF EEEGFKIEVD EASQKLFTSM LQKLAGNKWD
GDRDSWPQEL ADQDWARLTT DHSQCTNRHC PNFQQCAFYK AREGMGKVDV IVTNHDMVLA
DLALGGGAVL PDPRDTLYVF DEGHHLPDKA IGHFAHYTRL KSTADWLEQT AKNLAKLLAQ
HPLPGDLGKL IEQVPELARE IKGHQQFMFG ACEQLADFRA GEDMQGRERP RHRFVGGVIP
EHIREMGIEL KKGFARLDDL FTRLTELLKE GMDGEVNIGI ASHQAEEWYP LFGSLLARAH
GNWELWTAFT AEDPEDSPPM ARWLTLADSG AMFDIEVNAS PILAAEMLRR NLWNIAYGAL
VTSATLTALG KFDRYRMRAG LPKGAVTAVV PSPFHHADAG VLRVPDLKAD PRDSVAHTAA
IIRDLPGLVE GSRGTLVLYS SRKQMQDVFD GLDRDWRKQV FIQGNLSKQE TLNKHKARVD
SGESSVLFGL ASFAEGVDLP GAYCEHVVIA KIPFAVPDDP VEAALAEWIE ARGGNPFMEI
AVPDASLRLV QACGRLLRTE EDRGTITLLD RRVVTQRYGK AILNALPPFR REIT