Gene Psyr_3820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3820 
Symbol 
ID3369355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4545277 
End bp4545822 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content62% 
IMG OID637654177 
Producthypothetical protein 
Protein accessionYP_236888 
Protein GI66047047 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00391965 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCACTG CAACCCCCTG CGTGACCCCT ACCCCCCATT TCGAAGCCAC CCTCTTCCTC 
CGCCACAGCC GCACCCTGCG CGCCATTTTC ACTGAATCTC AAGCCTGGTT CTGCCTCGCC
GACCTTGCGC GTCTGATGGG CAGGGCGCTG GATGAGCGCG CCACGCTCAA GCTCGATGCG
GATCAGCGTC GCGAGGTCTG GCTGGAAGCT CATGGCGAGT GCCAGCGGCA GTTGATGATC
AGCGAGTCTG GCGTGCTGGC GCTGCTGGTT CATCATTACG TGCCGGAGAA CCGCGCGCTG
CGTCAGTGGC TGACGCATGA GGTGCTGACG ACCTTGCATG ATCAACAGAA CGTCACGCTG
GATAACCCCA GAATGAGCCA GCTGCAATGG CCCGGCACAT CGCTGAGCGT GCTGCACTGG
CGCAGCGAAA CCTGGGTTCG CTTGCGCGAC ATGCCGAATG TGGTGGCCGA GGCAGCTCCT
CGTCCGAAGC GGCCGTTATG GCGCAGGATG TTGAAGCGCA TCAACACAAT GCGCACTGCC
GCCTGA
 
Protein sequence
MFTATPCVTP TPHFEATLFL RHSRTLRAIF TESQAWFCLA DLARLMGRAL DERATLKLDA 
DQRREVWLEA HGECQRQLMI SESGVLALLV HHYVPENRAL RQWLTHEVLT TLHDQQNVTL
DNPRMSQLQW PGTSLSVLHW RSETWVRLRD MPNVVAEAAP RPKRPLWRRM LKRINTMRTA
A