Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3820 |
Symbol | |
ID | 3369355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4545277 |
End bp | 4545822 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654177 |
Product | hypothetical protein |
Protein accession | YP_236888 |
Protein GI | 66047047 |
COG category | [K] Transcription |
COG ID | [COG3617] Prophage antirepressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00391965 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCACTG CAACCCCCTG CGTGACCCCT ACCCCCCATT TCGAAGCCAC CCTCTTCCTC CGCCACAGCC GCACCCTGCG CGCCATTTTC ACTGAATCTC AAGCCTGGTT CTGCCTCGCC GACCTTGCGC GTCTGATGGG CAGGGCGCTG GATGAGCGCG CCACGCTCAA GCTCGATGCG GATCAGCGTC GCGAGGTCTG GCTGGAAGCT CATGGCGAGT GCCAGCGGCA GTTGATGATC AGCGAGTCTG GCGTGCTGGC GCTGCTGGTT CATCATTACG TGCCGGAGAA CCGCGCGCTG CGTCAGTGGC TGACGCATGA GGTGCTGACG ACCTTGCATG ATCAACAGAA CGTCACGCTG GATAACCCCA GAATGAGCCA GCTGCAATGG CCCGGCACAT CGCTGAGCGT GCTGCACTGG CGCAGCGAAA CCTGGGTTCG CTTGCGCGAC ATGCCGAATG TGGTGGCCGA GGCAGCTCCT CGTCCGAAGC GGCCGTTATG GCGCAGGATG TTGAAGCGCA TCAACACAAT GCGCACTGCC GCCTGA
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Protein sequence | MFTATPCVTP TPHFEATLFL RHSRTLRAIF TESQAWFCLA DLARLMGRAL DERATLKLDA DQRREVWLEA HGECQRQLMI SESGVLALLV HHYVPENRAL RQWLTHEVLT TLHDQQNVTL DNPRMSQLQW PGTSLSVLHW RSETWVRLRD MPNVVAEAAP RPKRPLWRRM LKRINTMRTA A
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