| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3804 |
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| Symbol | |
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| ID | 3369339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4522205 |
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| End bp | 4524301 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637654162 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_236873 |
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| Protein GI | 66047032 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00343497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000140841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAACGGA ACGATGCAGA GAAACTACTG AAAGTCGCCA TCAACAACGG AGCCGCTACG
TTTAGGGATG GGCAATGGGA GGCGATTGAT GCTCTGGTCA ACCATCGCAA GAAACTGTTA
GTCGTTCAAC GCACTGGTTG GGGCAAGAGC TCTGTTTACT TTATCAGCAC GCGAATTCTG
CGTGATCGAG GGCAAGGCCC AACCATAATC ATATCGCCCC TACTAGCCCT GATGCGCAAT
CAGGTCGACG CAGCTCAGCG ACTAGGGATC AATGCCGTTA CCATTAACTC TACCAATACT
GACGAATGGG AAAAGGCCCG TCAGGATGTG CACGCCAACC GAGTAGATTG CTTGTTGATC
TCACCAGAGC GGCTAGCAAA TGACGGCTTC ATGGAAACCT TTCTGCAGCC CATCGCAGAT
CGCATCGGCT TGATGGTAAT AGATGAGGCG CACTGCATTT CCGACTGGGG GCATGATTTC
CGGCCCGATT ATCGCCGTAT CGTCAACATT CTGCGCTTCC TTCCCCCCAA CACACCCGTT
TTGGGTACGA CTGCGACTGC AAATACTCGG GTGGTGAACG ATATTCAGGC TCAGTTTGGA
GATATAAACA TCGTCCGTGG CCCTCTGGCC CGAGAAAGTT TGGCGTTACA AAATTTGATC
ATGCCCGATC AAGCCAGCCG TCTGGCATGG CTGGCGCAGA CCATTCCAAC CTTACCTGGG
ACGGGCATCG TTTATGCGCT CACCCAGCGC GATAGTGAGC AGGTCGCCCG CTGGCTTCGC
GCTAACGGAA TCGATGCTGC TTCCTATCAC AGTGATGTCG CCCACTCTGA CTTTGGCAAT
AGCGATCAAT ATCGCCAACA TCTAGAAGAT GAACTGCTGG CAAACAAGCT CAAGGTGCTC
GTCGCGACCA CTGCGTTAGG TATGGGCTAT GACAAGCCCG ACCTTGGCTT CGTCATTCAC
TATCAAGCGC CTAGCTCGCT TGTTGCCTAC TACCAGCAGG TCGGTCGGGC AGGACGGGCA
ATCGATTACT CACTCGGCTT GCTCATGTCT GGGGAAGAGG ACGAGAAAAT TCATGCGTTT
TTTAGACGCG CAGCTTTTCC TCCCGCAGGG CAGGTCAATC ATTTGCTGAG TGTCCTAGCG
AAATCCAATG GGCTGACGAT TCGTGAACTA GAAGAGCACA GCAACCTCTC ACATGGGCAG
ATTGAGAAAA TTCTCAAGCT CCTGAGCGTG GAAAGCCCAG CGCCACTCAT CAAGCACCAA
AGCAAATGGC TACGCACCCC AATCCATTAC GAGCTGGATC AGAATCGTGT TAGCAGGCTT
ACCGAGCTAC GAGAGCATGA ATGGCAGCAG GTTCTGGCAT ACTTGAATGA ACCAAGGTGC
CTTATGGCGT TCCTACGACA TGCATTGGAT GACGCGGAGA ATGATGCTTG CGGGAAATGC
GTGCGCTGCC TAGAGAGGGA GTTGGTATCA AGTAAAGTAG ACGGTAGATT GGTGCATCAA
GCCGCTACCT TTATTCGCCA TGCCGAGCTT CCAATCAAGC CCAAGAAGCA AATCGCCAAG
GGAGGCTTTG AGTATTACGG CTTCCCGACC AACCTCCCTC TCAACATACA GGCGGCTGAA
GGTAGAGTCC TTTCACAATG GCGTGATGGA AGCTGGGGAG AATTAGCTGC CAACGGCAAG
GAGCTCGGCC ATTTTGACGA TGCTCTGGTT TCAGCCATGG CAGAAATGAT CCAATCGCGC
TGGCAACCGA ATCCTAAACC CACGTGGTTG TGCTGCGTGC CTTCTCTAGG GCATCCAATG
TTAGTACCTG ACTTTGCTCA GCGCTTGGCG AATGCATTGG GGATCCCCTT CGTCAACTGT
GTGACCAAGG TAAGGCAAAA CGAGCCGCAA AAGTGGCAAA ACAATCGCTT CCACCAGTGT
CGGAATCTAG ATGGTGTGTT CGCCGTTAGT GCACATATTC CTCCTGGCCC GGTGCTGCTG
GTTGATGACA TGATCGATTC AGGCTGGACA ATGACCGTCA TTGCCGCACT GCTCAAACAA
GCGGGCAGCG AACACGTCTA CCCGCTGGCA ATCTCATCTA CGGCAAGCAA CGCATGA
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| Protein sequence | MQRNDAEKLL KVAINNGAAT FRDGQWEAID ALVNHRKKLL VVQRTGWGKS SVYFISTRIL
RDRGQGPTII ISPLLALMRN QVDAAQRLGI NAVTINSTNT DEWEKARQDV HANRVDCLLI
SPERLANDGF METFLQPIAD RIGLMVIDEA HCISDWGHDF RPDYRRIVNI LRFLPPNTPV
LGTTATANTR VVNDIQAQFG DINIVRGPLA RESLALQNLI MPDQASRLAW LAQTIPTLPG
TGIVYALTQR DSEQVARWLR ANGIDAASYH SDVAHSDFGN SDQYRQHLED ELLANKLKVL
VATTALGMGY DKPDLGFVIH YQAPSSLVAY YQQVGRAGRA IDYSLGLLMS GEEDEKIHAF
FRRAAFPPAG QVNHLLSVLA KSNGLTIREL EEHSNLSHGQ IEKILKLLSV ESPAPLIKHQ
SKWLRTPIHY ELDQNRVSRL TELREHEWQQ VLAYLNEPRC LMAFLRHALD DAENDACGKC
VRCLERELVS SKVDGRLVHQ AATFIRHAEL PIKPKKQIAK GGFEYYGFPT NLPLNIQAAE
GRVLSQWRDG SWGELAANGK ELGHFDDALV SAMAEMIQSR WQPNPKPTWL CCVPSLGHPM
LVPDFAQRLA NALGIPFVNC VTKVRQNEPQ KWQNNRFHQC RNLDGVFAVS AHIPPGPVLL
VDDMIDSGWT MTVIAALLKQ AGSEHVYPLA ISSTASNA
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