| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3773 |
|---|
| Symbol | |
|---|
| ID | 3369308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4491827 |
|---|
| End bp | 4493011 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637654131 |
|---|
| Product | GAF:ATP-binding region, ATPase-like:histidine kinase A, N-terminal |
|---|
| Protein accession | YP_236842 |
|---|
| Protein GI | 66047001 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.719874 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.310272 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGAT CCATTTCAAA TGATGTGGCC ACGATCAACC GGATCAGCGC AGTGCCGGCC
ATCCTGCAGG TCATTGCCGA ATCCACCGGG CTGGGTTTCG CCGCCGTGGC GCGTGTAACC
GAAACCAGCT GGACGGCCTG TGCGGTCCTG GACAAGCTCG ACTTCGGTTT GAAGCCCGGC
GGTGAGCTGG AGCTGAGCAG CACCATCTGC CACGAGATTC GCAGTTCCCA CAAGCCTGTG
GTGATTGACC ATGTCGCCGA GGACCCGCTG TTCTGTGCGC ATGACACACC ACGTCTGTAC
AGCTTCCAGA GCTATATCTC GGTGCCGATC TTTCTTTCCG ACGGCTCCTT TTTCGGCACT
ATCTGCGCGC TGGATCCCAA GCCTGCAAAG CTGATCGGGA CGCCCATCGA GGCCATGATG
GTGTCGTTCG CACGTCTTCT GGCGCTGCAG ATCGAGGCCG AGGAAAACCT GCAACAGGCG
CGTGAAGACC TGCTCGCCGA ACGTGAGGTG GCTGAGCTGC GCGAGCAGTT TATCGCGGTG
CTGGGGCACG ACCTGCGCAA CCCGTTGTTT GCCATCAATG CCAGTGCCGA ATTGCTGCTG
CGTCGTCCGC TGGATGAAAA GGCCCAGCAG ATCGTGCAAC ACATCCTGAC CTCTGGCCAG
CGCGCCTCGC AGTTGGTCGA TGACGTGCTC GATTTTGCCC GTGGTCGTAT GGGGCATGGC
ATTCCTCTGA GTATCCATGA GGCACACGGT CTGGATAAAA CCCTGGAGCA TGTGATTTCA
GAGGTGCAAC GCGTTCACCC GTCGCGGCCG ATTCACTCGA ACATAGGCGC GCTGGAGCGT
ATCCGCTGCG ATCATGAGCG GATCGCGCAG CTGCTCTCCA ACCTGGTGTC CAACGCGATC
AGCCATGGTG ATGCCGAGAG CCCGGTCGAA GTGACGGCAG GCGTGCATGG CGAGGTGTTT
GTGCTCAGCG TTACCAATCA GGGAGAGCCG ATACCTGAAT CGGTTCGTGC GCAACTGTTC
CTGCCGTACT CCAGACCCAT CACCGACGAG CCGCAAGCCG GGCTCGGGCT GGGGCTGTAC
ATCGCCAGCG AGATCGCCAT TGCTCATGGA GGTACGCTCG AGGTGTGCTC GACGCGAGAG
CAGGGCACGG TCTTTACCTT CAGTATGCCG TTGAAGTCTG CATAG
|
|---|
| Protein sequence | MRRSISNDVA TINRISAVPA ILQVIAESTG LGFAAVARVT ETSWTACAVL DKLDFGLKPG
GELELSSTIC HEIRSSHKPV VIDHVAEDPL FCAHDTPRLY SFQSYISVPI FLSDGSFFGT
ICALDPKPAK LIGTPIEAMM VSFARLLALQ IEAEENLQQA REDLLAEREV AELREQFIAV
LGHDLRNPLF AINASAELLL RRPLDEKAQQ IVQHILTSGQ RASQLVDDVL DFARGRMGHG
IPLSIHEAHG LDKTLEHVIS EVQRVHPSRP IHSNIGALER IRCDHERIAQ LLSNLVSNAI
SHGDAESPVE VTAGVHGEVF VLSVTNQGEP IPESVRAQLF LPYSRPITDE PQAGLGLGLY
IASEIAIAHG GTLEVCSTRE QGTVFTFSMP LKSA
|
|---|
| |