Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3738 |
Symbol | |
ID | 3369273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4452018 |
End bp | 4454147 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637654096 |
Product | ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ |
Protein accession | YP_236807 |
Protein GI | 66046966 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.145176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0175539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAGC AGGCACAACG CGTACTTAAA GACATCTTCG GTTACGACAG CTTTCGTGGT CGCCAGGGTG CCATTATTGA GCGTGTAGCC AGCGGTGGTG ATGCGCTGGT GCTGATGCCC ACCGGTGGCG GCAAGTCCCT GTGTTTTCAG GTGCCGGGGC TGTTGCGTGA CGGGCTGTGC GTGGTCGTGT CGCCACTCAT CGCGCTGATG GACGACCAGG TTGCCACGCT GGATGAGCTG GGCGTGTCGG CCGCTGCACT CAACTCGACC CTCAGCGCCG AGCAGCAGCG CGACCTGGCG AACCGCATTC GTCTGGGCGA AGTCAAAATG CTCTACCTCG CCCCGGAGCG CCTGGTCCAG CCGCGCATGC TGTCATTCCT GCAAAACCTC AAGATCGCCC TGTTTGCCAT CGACGAAGCG CACTGCGTGT CGCAATGGGG CCATGACTTC CGCCCTGAAT ACCTGCAACT GGGGCAACTC GCCGAGCTGT TTCCGGAGGT GCCGCGCATC GCGCTGACCG CCACCGCCGA CAAGCGCACC CGTGAAGAAA TCGTCACGCG TCTGCACCTG CAGAACGCCG AGCGCTTTCT GTCGAGCTTC GACCGGCCCA ACATCTTCTA TCGCATCGTG CCCAAGGAAC AGCCGCGCAA GCAACTGCTG GCGTTTCTTT CCGAGCGCCG CAGCGACGCC GGTATCGTTT ACTGCCTGTC ACGCAAGAAG GTCGATGAGG TCGCCGTATT CCTGAGTGAC AACGGCTATC CCGCGCTGCC TTATCACGCC GGTCTGCCGT CCGAAACCCG AGCTGCGAAC CAGAAGCGCT TTCTCAACGA GGAAGGGCTG ATCATGGTTG CCACCATCGC GTTCGGCATG GGCATCGACA AGCCCAACGT GCGTTTTGTC GCGCACATGG ACCTGCCCAA ATCGCTTGAG GCTTATTATC AGGAAACCGG CCGGGCAGGG CGTGATGGCC TGCCCGCCGA TGCCTGGATG GCCTACGGTC TGCAAGACGT GCTGATGCTC AAGCAGATGC TGCAGAACTC CGAAGGCGAC GAGCGCCACA AACGGCTGGA GCAGCACAAG CTCGATGCCA TGCTGGCCCT GTGCGAAGAA ACCCGTTGCC GTCGGCAGAC CCTGCTGGCC TATTTCGACG AAGACATGCC CAACCCGTGC GGCCATTGCG ACAACTGCGT CGATGGCGTG CAAACCTGGG ATGCCACGGA ACCTGCGCGT CAGGCGCTGT CGGCCATCTA CCGTACCGGC CAGCGTTATG GCGTCGGTCA TCTGGTTGAC GTGTTGCTCG GCAAGTCCAA CGACAAGGTG GAGAGCTTCG GTCATCAGCA TCTGTCGGTG TTCGGGGTCG GCAAGGCGCG CACCGAGTCC GAGTGGCGCT CGCTGTTCCG CCAGCTGGTT GCGCGCGGTC TGGCGGACAT CGACCTTGAA GGCTATGGCG GCCTGCGCCT CAGCGAGACG TGCCGCCCTT TGCTGCGGGG CGAAGTTTCT CTGGAACTGC GCCAGGACCT CAAGCCACAA ACCACGTCGA GAAGCAGTTC CGGCAGCCCG GCCAGTCAAC TGGTGCGTGG CGAAGAGCGC GAGCAGTGGG AAGCCCTGCG CGCGCTGCGC CGCAAGCTGG CCGAAGAGCA CGGCGTCCCG CCTTACGTTA TTTTCCCGGA CTCGACCCTG CTGGAGATGC TGCGCAGCAA ACCCGGATCG ATGGCCGAGA TGGCCAAGGT CAGTGGCGTC GGTGCGCGCA AGCTGGAGCG TTATGGCGAA GCCTTTCTCG AAGTGCTCAG CGGCAAGGCC GAGGCACCAC GGGTGGTCGC CGATGTGCGT CACGAACTGA TCAGCCTGGC GCGCGCGGGT ATGACCCCGA CGCAGATCGC CGGTCAGTTG CAGTGCTCGG AAAAGAATGT CTACACCCTG CTGGCCGAAG CCATCGGCAA GCAGCAGTTA TCCATCGAGC AGGCGCTGGA CTTGCCGGAG GACCTGCTGG GTGAGGTGCA GGACGCCTTT CTCGACGGCG AAGGCGAACT GCCGCCGGTG TCGGCGATTG CCGAGCAGTT TGCCGGGCGG GTGCCTGAGG GTGTTTTGTA TTGCGTGCGT GCAGCGCTGC AATCGGAGTT TGAGGTATAA
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Protein sequence | MLEQAQRVLK DIFGYDSFRG RQGAIIERVA SGGDALVLMP TGGGKSLCFQ VPGLLRDGLC VVVSPLIALM DDQVATLDEL GVSAAALNST LSAEQQRDLA NRIRLGEVKM LYLAPERLVQ PRMLSFLQNL KIALFAIDEA HCVSQWGHDF RPEYLQLGQL AELFPEVPRI ALTATADKRT REEIVTRLHL QNAERFLSSF DRPNIFYRIV PKEQPRKQLL AFLSERRSDA GIVYCLSRKK VDEVAVFLSD NGYPALPYHA GLPSETRAAN QKRFLNEEGL IMVATIAFGM GIDKPNVRFV AHMDLPKSLE AYYQETGRAG RDGLPADAWM AYGLQDVLML KQMLQNSEGD ERHKRLEQHK LDAMLALCEE TRCRRQTLLA YFDEDMPNPC GHCDNCVDGV QTWDATEPAR QALSAIYRTG QRYGVGHLVD VLLGKSNDKV ESFGHQHLSV FGVGKARTES EWRSLFRQLV ARGLADIDLE GYGGLRLSET CRPLLRGEVS LELRQDLKPQ TTSRSSSGSP ASQLVRGEER EQWEALRALR RKLAEEHGVP PYVIFPDSTL LEMLRSKPGS MAEMAKVSGV GARKLERYGE AFLEVLSGKA EAPRVVADVR HELISLARAG MTPTQIAGQL QCSEKNVYTL LAEAIGKQQL SIEQALDLPE DLLGEVQDAF LDGEGELPPV SAIAEQFAGR VPEGVLYCVR AALQSEFEV
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