| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3734 |
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| Symbol | |
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| ID | 3369269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4443425 |
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| End bp | 4446430 |
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| Gene Length | 3006 bp |
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| Protein Length | 1001 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637654092 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_236803 |
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| Protein GI | 66046962 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat
[TIGR03304] outer membrane insertion C-terminal signal |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.29394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGT CGAAGTGCGT GGGTGTTGTC CGTTATTCGT TCAAGCCTGT AGCAACAGGT
GCGCTGTGTG CGCTGTCTTT TACGTTTGGC TGCTCGGCTT ATGCTGACTA TGTCGAGCAG
GGCAAGCCGG GTGACGCGGC CAGCTGGCGG TCGGCAGAAT TCCAGAGCGA CTGGGGTCTG
GGCCGTATCC AGGCTGATCA GGCCTACGCC GCCGGCATCA CCGGGGCAGG CGTCAAGATC
GGTGCGCTGG ACTCGGGTTT CGACCCGTCC CACCCGGAAG CCACGCCGTC CCGCTACCAC
GCAGTCACCG CCACCGGCAC CTACGTTGAC GGCTCACCGT TCAGCATCAC TGGCGCCATC
AACCCGAACA ACGACACCCA CGGCACGCAC GTCACCGGCA CCATGGGCGC GGCGCGTGAT
GGCGTCGGCA TGCACGGCGT GGCCTACAAC GCCCAGGTAT ACGTCGGCAA CACCAACCAG
AATGACAGCT TCCTGTTCGG CCCTAACCCT GACCCGCAGT ATTTCAAGGC GGTGTACGGC
GCCTTGGCGG ATGCGGGCGT GCGCGCCATC AACAACAGCT GGGGCAGCCA GCCGGCCGAC
GTGACTTACG CCACCGAAGC GGGCGTGCGC GCTGCCTACG CTCAGCACTA CAACCGCGGC
ACCTGGCTGG ACGAAGCGGC GAATGTCTCG CGCAAGGGCG TGATCAACGT CTTCAGCGCA
GGCAACACCG GTTACGCCAA CGCCAGCGTG CGCGCTTCGC TGCCTTTTTT CGAGCCGGAT
CTTGAAGGCC ACTGGCTGGC CGTGTCGGGC CTCGACAGCA GCAACGGTCA ACGCTACAAC
CAGTGCGGCC TGTCCAAATA CTGGTGCATC ACCATGCCCG GTCGGCTGGT CAACAGCACC
GTGCCGGGCG GCGGCTATGG CATCAAATCC GGCACCTCGA TGTCCGCGCC GCATGCCACC
GGCGCACTGG CGCTGGTGAT GGAACGCTTC CCGTACATGA CCAACGAGCA GGCGCTGCAA
GTGCTGCTGA CCACCGCCAC CCAGCTCGAC GGTTCGATTA CTCAGGCACC GACCAACAGC
GTCGGCTGGG GTGTGGCGAA CCTGGAGCGG GCGATGCGTG GTCCGGGCCA ATTGCTCGGC
ACCTTCGATG CCAGTCTGGG TGCAGGGTTG ACTGATGTGT GGAGCAATAA TATTTCCGAT
CAGGCGCTGA TCCAGCGTCA GGCCGAGGAC AGCGCCGAGC AGGCCACCTG GCAGCAGACG
CTGATCAGCA AAGGCTGGCA GAACGGCGTT GCCAGCACCG CCAGCCAGCA GGATCAGGCC
GACTACGCCA CCGGCACCGC TCGCGCCGCC GCTGCTGCAC AGCGCCAGTA TCAGGGCAGC
CTGATCAAAT CCGGCGCAGG CCGCCTGATT CTCGACGGCG CCAACACCTA TCGCGGTGAC
ACCTTGGTCA ACGGCGGCGT GCTGTCGGTC AATGGGTCGC TGGTGTCAGC CGTGCAGGTC
AACGCGGGCG GTACGCTGGG CGGCAACGGC CAGATCGGCG GGCTGACAGC GCGCAACGGC
GGTATTGTCG CGCCGGGTAA TTCCATCGGT ACATTGCAGG TCAATGGCGA TGTAACCCTC
GAGCCGGGTT CAACCTACGC CGTGGAGCTT TCACCAACCG CCAGTGACCG CATCGTCGCC
ACCGGCAGCG CCACTGTGTC AGGCGCGAAC ATGACACTGG CGCTGGAGAA TGCGACGCCA
GTGGCCTTGA GTGCTGCACC CGTCCAGAGC GTAGTCGGTC GCCGGTACAA CGTGTTGCAA
GCCGCCAATG GCATCAACGG TCAGTTTGGC AGCGTGTCCT CCAACTACGC CTTCCTCGGT
GGTCGACTCG ACTACGCAGC CAACGCGGTC GCACTGAACG TCGAGCAAAC CGCCGCTTTC
AACAGCGTGG CGCAAACCCC CAACCAGGCT GCGGTGGCGA CTGCCGCCGA ACAACTTGGC
GCCGGTAACG CGGTGTACGA AAACCTGCTG CTTACCCAGA GCGCTGCCTC TGCACGCGAC
AGCTTCCAGC AATTGTCCGG CGAAATTTAC CCGGCCATCG GCAGCGTGTT GATCAACGAC
AGCCGTCAGG TTCGCGATGC CGTGGGTGAG CGCCTGGGTG CCAGCGTGTT CGGCACTGAT
GGCAACACTG CCGCACAAGA CAACGTCTGG CTCAAGGCGC TGGGTGCCTG GGGCAAGACC
GACTCGCGTG ACGACACCGC GGGTTACACC TCTTCGATTG GCGGGCTGCT GGCCGGTGTC
GATGGCAACC TTGCCGATGA CACGCGTCTG GGCGTCGTCG CAGGCTACAG CGACAGCTCG
TTGAACATGG GCTCCGGCAC GCATTCGCGG GCTTCGGTGG ACAGCTACCA TTTGGGTGCG
TACCTGGGCC ATGAAATCGG TGCACTGCGC CTGACCATCG GCGCCGCACA CAGCTGGCAT
CGCATCGATG CGCAACGCGA CGTGCAGGTC GGCGGTGCAG CGGGCAAGGA GAAAACCAAA
CACGATGCGC AGAGCACCCA AGTGTTCACC GAGGCGGCGT ATCGCATTCA CCTGCAACCC
GCCACGCTTG AGCCGTTTGC CAATCTGGCC TATGTCCACC TGAACACCGA TGGCTTCACC
GAGAAGGGCG ACGCTGCCGC GCTGTCTGCC GGTAGCGACA ACCGTGATGC GGTACTCAGC
ACTCTGGGCC TGCGTGCCCT GAAGACCATC GCCATCAGCG ACCGGCAGAA GGTCGACCTG
TCCGGCAGCC TCGGCTGGCA GCACAACCTG AGCAACACCG ATTCCGAACA GCACCTGGCA
TTCGCTTCCA GCGGCAACAG CTTCGGCATC GAAAGCTCGC CGCTGGTGCG TGATGCCGCG
CTGGTCGGTG CTCACGCCAG TCTGGCGTTG AGCAAGGAGG CAAGGATCAG CCTTGATTAC
AGCGGCCAGC TGTCCAGTCG TGAGAAAAGT CACGGTGTCG GCCTGAGTCT TAACTGGCAG
TTCTAA
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| Protein sequence | MQKSKCVGVV RYSFKPVATG ALCALSFTFG CSAYADYVEQ GKPGDAASWR SAEFQSDWGL
GRIQADQAYA AGITGAGVKI GALDSGFDPS HPEATPSRYH AVTATGTYVD GSPFSITGAI
NPNNDTHGTH VTGTMGAARD GVGMHGVAYN AQVYVGNTNQ NDSFLFGPNP DPQYFKAVYG
ALADAGVRAI NNSWGSQPAD VTYATEAGVR AAYAQHYNRG TWLDEAANVS RKGVINVFSA
GNTGYANASV RASLPFFEPD LEGHWLAVSG LDSSNGQRYN QCGLSKYWCI TMPGRLVNST
VPGGGYGIKS GTSMSAPHAT GALALVMERF PYMTNEQALQ VLLTTATQLD GSITQAPTNS
VGWGVANLER AMRGPGQLLG TFDASLGAGL TDVWSNNISD QALIQRQAED SAEQATWQQT
LISKGWQNGV ASTASQQDQA DYATGTARAA AAAQRQYQGS LIKSGAGRLI LDGANTYRGD
TLVNGGVLSV NGSLVSAVQV NAGGTLGGNG QIGGLTARNG GIVAPGNSIG TLQVNGDVTL
EPGSTYAVEL SPTASDRIVA TGSATVSGAN MTLALENATP VALSAAPVQS VVGRRYNVLQ
AANGINGQFG SVSSNYAFLG GRLDYAANAV ALNVEQTAAF NSVAQTPNQA AVATAAEQLG
AGNAVYENLL LTQSAASARD SFQQLSGEIY PAIGSVLIND SRQVRDAVGE RLGASVFGTD
GNTAAQDNVW LKALGAWGKT DSRDDTAGYT SSIGGLLAGV DGNLADDTRL GVVAGYSDSS
LNMGSGTHSR ASVDSYHLGA YLGHEIGALR LTIGAAHSWH RIDAQRDVQV GGAAGKEKTK
HDAQSTQVFT EAAYRIHLQP ATLEPFANLA YVHLNTDGFT EKGDAAALSA GSDNRDAVLS
TLGLRALKTI AISDRQKVDL SGSLGWQHNL SNTDSEQHLA FASSGNSFGI ESSPLVRDAA
LVGAHASLAL SKEARISLDY SGQLSSREKS HGVGLSLNWQ F
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