| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3733 |
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| Symbol | |
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| ID | 3369268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4440217 |
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| End bp | 4443333 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637654091 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_236802 |
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| Protein GI | 66046961 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.418268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.311183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATG CATTCAGTAC CCGACACACC TCTGTCAAAT CCCTAAGACA GGCCATTCGA
GCGGTCAATC GCGCCTCCTG CGGCGCGCTC GCCTGCTACC TGGCGACACT GGGCGTGGCT
CATGCCGCAC CTTATGTGGA AGCAGGGCAG GCGGGCAACG CTGCCAGCTG GCGCAGCGCC
GAGTTCAATG CCGACTGGGG CCTGGGCGCG ATCAACGCTG ATCAAGCCTA TGCCGCAGGT
TACAGCGGTA AGGACATCAA ACTGGGCATC TTCGACCAGC CGGTCTACGC CCCGCATCCG
GAATTCGACA GCCCCAACAA GGTAGTCAAT CTGGTCACCA GCGGCATCCG CGAATACACC
GACCCGTACA TCCCGGTGAA GGCGGGCGAC GCTTTCCGCT ACGACGGCGC ACCGAGCCTG
GACTCCGGCG GCAAACTCGG TAACCACGGC ACCCACGTCG GCGGCATTGC CGGTGGCAAT
CGCGACGGCG GGCCGATGCA CGGCGTGGCC TACAACGCGC AAATCATCAG CGCCGACAAC
GGCGACCCGG GCCCGGAAGA CGGCATCGTG CTGGGCAACG ACGGCGCGGT GTATCAGGCT
GGCTGGAACG CGCTGGTCAA CAGCGGCGCA CGGGTCATCA ACAACAGCTG GGGCATCGGC
ATCACCGACC GCTTCGACAA AGGCGGGCGC GATCCGGCGT TCCCGCACTT CACCGTGCAG
GACGCGCAAG TGCAGTTCGA CCAGATTCGC CAGATCCTCG GCACGCGTCC GGGTGGCGCG
TATCAGGGCG CGATCGACGC CGCACGCAGC GGCGTGGTGA CCATCTTTGC CGCAGGTAAC
GACTACAACC TCAACAACCC TGACGCAATG GCTGGGCTCG GCTACTTCGT ACCAGACATC
GCCCCCAACT GGCTGACCGT CGCCGCCCTG CAACAAAATC CGGATGCCGC AGCGGCCGCT
ACCACGCCCT ACACGCTGAG CACCTTCTCG TCGCGCTGCG GCTACACCGC CAGCTTCTGC
GTCTCGGCAC CGGGCACGCG CATCTACAGC TCGGTGCTCA ACGGCACCAG CCTGGCAGAC
CTGACCGTCG GCTGGGCCAA CAAGAACGGC ACCTCGATGG CTGCGCCTCA TGTCGCAGGC
AGCATGGCCG TGCTGATGGA ACGCTTCCCG TACATGACCG GCGCGCAGGT CGCCGACGTC
CTGAAGACCA CCGCCACCGA CCTTGGCGCG CCGGGCGTCG ACGCGCTGTA CGGCTGGGGC
ATGATCAACC TCGGCAAGGC CATCAACGGC CCGAGCATGT TCGTCACCGA AGCGGACATC
CCTGCCGAGT TCCGTATCGA CGGCGCCTAC GGCGACAGCC AGTTCGTGGC TGACCTGCCT
GGCGTCGGTG CGATTGTCGA TGCCGGCAAA CCGACGCAGC GCACCTGCAG CGGGCCGCAA
TGTGGGCTGG ACGTGTGGAG CAACGACATC TCAGGCCACG GCGGCCTGAC CAAGCAAGGC
ATCGGCACCC TGGTGTTGAG CGGGGCCAAC AGCTACAGCG GCCCGACGCT GGTTAATCAA
GGACGCCTGG CCATCAACGG CTCTCTGGCC TCGGCCGTCA CCGTCAACAA CGGCGGCATT
CTGGGTGGCA ATGGCAGCGT CGCGTCGCTG AATGCCAACC AGGGCGGCAC CGTCGCGCCG
GGCAACTCCA TCGGCACCCT GCAAGTGGCG GGCGACCTCA ACCTGGCACC GGGCTCGACC
TACGCGGTCG AGTTTTCGCC CACCGCCAGC GACCGTATCG TGGTCGGCGG CACCGCGACC
GTGAGCGGCG CCAACATGGC CCTGTCTCTG GAAAACGACA ACCCCGCACT GCTCAGTAGC
AACCAGACCA GCAGCGTTCT GGGTCAGCAG TTCAACGTGC TGCAGGCGGC TGGCGGCGTT
CAGGGTCAGT TCGGTTCTGT GACCGATAAC TACGCATTCC TGGACGGCAA CCTGGCCTAT
ACCGGCACCG GCGTGACCCT GGCCCTTGCA CGTAATGGCG ACAGCTTCGC CAGCGCCGCA
CAAACCGACA ACCAGCGCAG CGTGGCCCAG GCCATCGAGC AACTGAGTGC GGGCAACTCG
GTTTACGAGA GCATCATCCT CAGCCAGGAC ACGGCCAGCG CACGGCGTGC CTTCACCCAA
CTGTCGGGCG AGGTGCATCC GGCCATCGCC ACACAACTGA TCAACGACAG TCGCCAACTG
CGCGACGCCG TGGGTGACCG TCTGCGCGTG GAAGGCTTGT ACGACCAGCC AGCACCGGGC
AGTGAAGACA ACTCGGTGTG GGTCAAAGCG CTGGGTGCCT GGGGCAAAAA CAGCGGCAGC
AGCGACAGCG CCAGCTCGAC CTCATCGCTG GGCGGCCTGC TTGCCGGTGT GGACGGCCTG
ATCAGCGAGC ACACCCGCTT GGGCGCGATG GCAGGATACA GCGACACCTC GCTGAGCCTG
GGCGACGACA CCCACTCGCG GGCCTCGGCA GACAGCTACC ACCTGGGCGC CTACATCGGC
CACGAACAGG GCGCACTGCG CCTCACCGCA GGCGCATCGC ACAGCTGGCA CCGCATCGAC
GTGAAACGCG ACCTGCAATT CGGCGCGTTC TCCGACCGCC AGAAAGTCAA ACGCGACGCC
CAGTCGAGCC AGGTGTTCAC CGAAGCCGCC TACCGCCTGA ACCTGCAACC GCTGGCACTG
GAGCCATTCG CCAACCTGGC TTACGTCCAC TTCGACAGCG ACAGCTTCAC CGAAAAAGGC
GGCGCCACGG CCCTCAAAGG CAGCGACGAC ACCCGCGACA CCGTGCTCTC AACCCTGGGC
ATGCGCGCCG GTAACCGCTT CAACCTCAAC GACACACAAA AACTCGACGT CTCCGCCACC
CTCGGCTGGC AGCACAACCT GAGCGACACC TCGTCTGAAC AACACCTGGC CTTCGCCAGC
GCTGGCAACA GCTTCAACGT ACAAAGCGTC TCCATGGACC GCGACGCCGC CGTCGTCGGC
GCCCGCGCCA GCCTGGCACT GGGCAGGGAT GCGCGCATCA ACCTGGACTA CAACGGTTTG
CTGGGTGCGC GGGATAAAAC CCACGGTGTG GGTCTGTCGC TGGATTGGCA GTTCTGA
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| Protein sequence | MKDAFSTRHT SVKSLRQAIR AVNRASCGAL ACYLATLGVA HAAPYVEAGQ AGNAASWRSA
EFNADWGLGA INADQAYAAG YSGKDIKLGI FDQPVYAPHP EFDSPNKVVN LVTSGIREYT
DPYIPVKAGD AFRYDGAPSL DSGGKLGNHG THVGGIAGGN RDGGPMHGVA YNAQIISADN
GDPGPEDGIV LGNDGAVYQA GWNALVNSGA RVINNSWGIG ITDRFDKGGR DPAFPHFTVQ
DAQVQFDQIR QILGTRPGGA YQGAIDAARS GVVTIFAAGN DYNLNNPDAM AGLGYFVPDI
APNWLTVAAL QQNPDAAAAA TTPYTLSTFS SRCGYTASFC VSAPGTRIYS SVLNGTSLAD
LTVGWANKNG TSMAAPHVAG SMAVLMERFP YMTGAQVADV LKTTATDLGA PGVDALYGWG
MINLGKAING PSMFVTEADI PAEFRIDGAY GDSQFVADLP GVGAIVDAGK PTQRTCSGPQ
CGLDVWSNDI SGHGGLTKQG IGTLVLSGAN SYSGPTLVNQ GRLAINGSLA SAVTVNNGGI
LGGNGSVASL NANQGGTVAP GNSIGTLQVA GDLNLAPGST YAVEFSPTAS DRIVVGGTAT
VSGANMALSL ENDNPALLSS NQTSSVLGQQ FNVLQAAGGV QGQFGSVTDN YAFLDGNLAY
TGTGVTLALA RNGDSFASAA QTDNQRSVAQ AIEQLSAGNS VYESIILSQD TASARRAFTQ
LSGEVHPAIA TQLINDSRQL RDAVGDRLRV EGLYDQPAPG SEDNSVWVKA LGAWGKNSGS
SDSASSTSSL GGLLAGVDGL ISEHTRLGAM AGYSDTSLSL GDDTHSRASA DSYHLGAYIG
HEQGALRLTA GASHSWHRID VKRDLQFGAF SDRQKVKRDA QSSQVFTEAA YRLNLQPLAL
EPFANLAYVH FDSDSFTEKG GATALKGSDD TRDTVLSTLG MRAGNRFNLN DTQKLDVSAT
LGWQHNLSDT SSEQHLAFAS AGNSFNVQSV SMDRDAAVVG ARASLALGRD ARINLDYNGL
LGARDKTHGV GLSLDWQF
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