Gene Psyr_3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3716 
Symbol 
ID3369251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4402990 
End bp4403733 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content65% 
IMG OID637654075 
Productresponse regulator receiver:transcriptional regulatory protein, C-terminal 
Protein accessionYP_236786 
Protein GI66046945 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.422774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0121745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTGG AACCACACAC CTGGCACGTA TTGATCGTCG AGGATGACCA GCGACTGGCC 
GAACTGACCA GCGATTACCT GCAGAACCAC GGCCTGCGCG TGAGCATCGA AGGCGACGGC
GCGCTGGCGG CAGCGCGGAT CATCGCCGAG CAGCCGGATC TGGTGATTCT CGACCTGATG
CTGCCCGGCG AGGACGGTTT CAGCATCTGC CGCAGTGTGC GTGACCGCTA CGACGGGCCG
ATTCTGATGC TCACCGCGCG CACTGACGAC ACCGACCATA TAGAAGGACT CGACACCGGC
GCCGACGATT TCGTCTGCAA ACCGGTGCAT CCGCGCGTGC TGCTGGCGCG TATCAAAGCC
CTGCTGCGCC GCAGTGAAGC GCCGCAGGTG CCGGCTGCCG AGCTGCGCCG TCTGGTGTTC
GGGCCGTTGG TGGTGGACAA CGCACTGCGT GAGGCCTGGC TTCGCGAGCA GAGCATCGAG
CTGACCGGTG CCGAGTTCGA CCTGCTGTGG CTGCTGGTGG CCAACGCCGG GCGCACGCTG
TCCCGCGAAG AGATTTTCAC CGCGCTGCGC GGTGTGGGGT ACGACGGGCA GGATCGCTCC
ATCGATGTGC GTATCTCGCG TATCCGCCCG AAAATCGGCG ACGATCCCAT TCATCCGCGT
CTGATCAAGA CCGTGCGCAG CAAGGGCTAT CTGTTTGTGC CCGAAGCGGC GCAGGACATG
AGCGGCCACG TGTTCAGCGG CTGA
 
Protein sequence
MAVEPHTWHV LIVEDDQRLA ELTSDYLQNH GLRVSIEGDG ALAAARIIAE QPDLVILDLM 
LPGEDGFSIC RSVRDRYDGP ILMLTARTDD TDHIEGLDTG ADDFVCKPVH PRVLLARIKA
LLRRSEAPQV PAAELRRLVF GPLVVDNALR EAWLREQSIE LTGAEFDLLW LLVANAGRTL
SREEIFTALR GVGYDGQDRS IDVRISRIRP KIGDDPIHPR LIKTVRSKGY LFVPEAAQDM
SGHVFSG