Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3716 |
Symbol | |
ID | 3369251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4402990 |
End bp | 4403733 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637654075 |
Product | response regulator receiver:transcriptional regulatory protein, C-terminal |
Protein accession | YP_236786 |
Protein GI | 66046945 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.422774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0121745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTGG AACCACACAC CTGGCACGTA TTGATCGTCG AGGATGACCA GCGACTGGCC GAACTGACCA GCGATTACCT GCAGAACCAC GGCCTGCGCG TGAGCATCGA AGGCGACGGC GCGCTGGCGG CAGCGCGGAT CATCGCCGAG CAGCCGGATC TGGTGATTCT CGACCTGATG CTGCCCGGCG AGGACGGTTT CAGCATCTGC CGCAGTGTGC GTGACCGCTA CGACGGGCCG ATTCTGATGC TCACCGCGCG CACTGACGAC ACCGACCATA TAGAAGGACT CGACACCGGC GCCGACGATT TCGTCTGCAA ACCGGTGCAT CCGCGCGTGC TGCTGGCGCG TATCAAAGCC CTGCTGCGCC GCAGTGAAGC GCCGCAGGTG CCGGCTGCCG AGCTGCGCCG TCTGGTGTTC GGGCCGTTGG TGGTGGACAA CGCACTGCGT GAGGCCTGGC TTCGCGAGCA GAGCATCGAG CTGACCGGTG CCGAGTTCGA CCTGCTGTGG CTGCTGGTGG CCAACGCCGG GCGCACGCTG TCCCGCGAAG AGATTTTCAC CGCGCTGCGC GGTGTGGGGT ACGACGGGCA GGATCGCTCC ATCGATGTGC GTATCTCGCG TATCCGCCCG AAAATCGGCG ACGATCCCAT TCATCCGCGT CTGATCAAGA CCGTGCGCAG CAAGGGCTAT CTGTTTGTGC CCGAAGCGGC GCAGGACATG AGCGGCCACG TGTTCAGCGG CTGA
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Protein sequence | MAVEPHTWHV LIVEDDQRLA ELTSDYLQNH GLRVSIEGDG ALAAARIIAE QPDLVILDLM LPGEDGFSIC RSVRDRYDGP ILMLTARTDD TDHIEGLDTG ADDFVCKPVH PRVLLARIKA LLRRSEAPQV PAAELRRLVF GPLVVDNALR EAWLREQSIE LTGAEFDLLW LLVANAGRTL SREEIFTALR GVGYDGQDRS IDVRISRIRP KIGDDPIHPR LIKTVRSKGY LFVPEAAQDM SGHVFSG
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