| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3655 |
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| Symbol | |
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| ID | 3369190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4340335 |
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| End bp | 4342797 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637654014 |
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| Product | PAS:GGDEF |
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| Protein accession | YP_236725 |
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| Protein GI | 66046884 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.979803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.755172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAC CATGGACCTT CTCCAAGCCC CGTCTGTTGG GCATCGTATG GCCTTTCATT
GCCGTCGCGC TGTTTCAGGC GTTGCTGGGA TGCGTCAGTC TCTACACCAT GTCTGCCGTG
CGCAGCTATG TGGCGGGGGA GAGTCTCTGG TCCAAGGGGC AGAAGGACGC TATCCACTAC
CTGAGCCTGT ACGCCAACCG GCATGATGAG CGTGACTACC TCAAGTATCA AAAAGCCTTT
TCCGTGCCTC AGGGCGGCCA TGCGCTGCGC AAGGCGCTCG ATCAGCCCAT CCCGTCCCTG
GCGGATGCCA GAGGCGGAAT CATTCAGGGC GGCAATCACC CGGATGATGT GAATGGCATC
ATCTGGATGT ACCTGAACTT CCACAACTTC AGTTTCATGA AACAGGCCAT TCATTTCTGG
GAAGTGGGTG ATGGCTACCT CATGCAGCTC GACGAACTTG CCCGGCACAT CCACGACCGG
GTCGGTCAGG GGGCTGTGAG CGCCGCCGAG GTCGATCAAT GGCGCGAGCA GATCAATGTC
ATCAATGAAG GCGTCACGCC TGCTGCGCGT GCGTTCAGTG ATGCGCTGGG CGAAGGCTCA
AGGCTGATCC TCAACCTGTT GATAGCGGTC AATCTGATCA CCGCCGTGGT ATTGATTCTT
CTGGCACTGC TGCGGGTGCG CCGTCTGATC GTCCAGCGCC GCGTGTTTGC CGACGCCCTG
CAACTGGAGA AGGAGCGGGC GCAGATCACG CTGGAGTCCA TCGGCGACGG GGTGATCACC
ATCGATGTGG CCGGCGCCAT CGTCTACATG AACCCGGCCG CCGAGGGCCT CACCCACTGG
AAAGGCACTC AGGCCAGCGG GCTTCCGCTG GCTGCGCTGT TCAATCTGCT GGATGAAAAC
GATCAGAAGG ACCAGTCAAC GCTGGTCGAG CAGATCATCA CCGGCAAGCT CAAGGGTGGC
AGCGCCAACA GCAAGCTGAT CCAGCGCCTT GATGGCAGCA CGGTGTCGGT CGCGCTGGTC
GGCACGCCGA TCTACACCGA AGGCGTGATC AGTGGCGCGG TGCTGGTGCT GCATGACATG
ACCCAGGAGC AGCAGTACAT CGCCGATCTG TCGTGGCAGG CTGCCCATGA TCCTCTGACC
GGCCTGGTCA ACCGCAGCGA GTTCGAACGC CGTTTGCAGC GAGTGCTCGA CGAAGACTGC
GGTCAGGGCC GGAGCCATTG CCTGATGTTT CTCGATCTGG ACCAGTTCAA GCTGGTCAAT
GATACCGGTG GTCATGCGGC GGGTGATGAA CTGCTGCGCC AGCTGTGCCG GGCCTTGCCG
CAGGGCTTGC GTGACGGGGA TACGCTGGCC CGGCTGGGAG GCGACGAGTT CGGTGTGTTG
CTGGTCGATT GTCCTGCCGA AACGGCGCTC GATATGGCCG AGGCGTTGCG CGAAGTGGTG
CAGCGTCTGC ATTTCATGTG GAAAGGTCGG CCATTCATGA CTACCGTCAG TATTGGCCTG
GTACACCTCG GCGATACACC TGCGTCTCTG GAAGGATCAT TGTCTGCTGC AGACATGGCC
TGTTATATGG CCAAGGAAAG AGGTCGCAAC CGAGTCCAGG CCTACAGTGT GGATGACCTG
ACGCTGTCGA TGCGTTTCGG CGAGATGGCC TGGATACAGC GGCTGCACAT GGCAATGGAC
GAGAATCGCT TTTGCCTTTA TGCGCAGGAA ATCGCCTCAA TAAAGGGCGA AGTGGGCGAA
GTACGACACA TTGAGATCCT CTTGCGCCTG CGCGACGAGT CTGGACGAAT GGTCGTACCG
GACAATTTCA TTCCGGCCGC CGAACGCTAC GGCCTCATGA CCACCCTCGA TCGCTGGGTG
GTACACAATG TGTTCAAAGT CATTGCCCAG TGCCAGAGTG ATGATCGGCA TCAGGTGCCG
CAGGCACTAT GTGCTATAAA TTTGTCTGGA TCGAGTATCG GGGATGATAC GTTCCTCGAA
TACCTGAAAC AGCAGTTCAA GACGTTTGAC GTATCGCCCG GGATGATCTG CTTCGAGATC
ACCGAGACCA GTGCGATTGC CGACCTGCAA AGTGCGATCA GATTCATTAA CGAGTTGAAG
GCATTGGGGT GTCAGTTTTC CCTTGATGAT TTCTGCTCGG GTATGTCGTC TTTTGCCTAT
CTCAAGCACT TGCCGGTGGA TTTCCTGAAG ATCGATGGCA GTTTTGTGAA GGACATGCTC
GACAACCCGA TCAACAAGGC TATGGTCGAG GTGATCAATA ATATCGGTCA TGTCATGGGC
AAGCGCACTA TTGCTGAATA CGTTGAAACG CCGCAGATCG AATCTGCGTT GCAGGAAATG
GGCGTGGATT TTGCACAAGG CTATCTGATT TCCCGCCCTG AATTGTTCAC TTGCGAGAGT
CTTTATATTC AGCCCGTACG GCCTGACCCC CTGATGTTCG GCGCGCCAGG AACGCTACGT
TAA
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| Protein sequence | MKQPWTFSKP RLLGIVWPFI AVALFQALLG CVSLYTMSAV RSYVAGESLW SKGQKDAIHY
LSLYANRHDE RDYLKYQKAF SVPQGGHALR KALDQPIPSL ADARGGIIQG GNHPDDVNGI
IWMYLNFHNF SFMKQAIHFW EVGDGYLMQL DELARHIHDR VGQGAVSAAE VDQWREQINV
INEGVTPAAR AFSDALGEGS RLILNLLIAV NLITAVVLIL LALLRVRRLI VQRRVFADAL
QLEKERAQIT LESIGDGVIT IDVAGAIVYM NPAAEGLTHW KGTQASGLPL AALFNLLDEN
DQKDQSTLVE QIITGKLKGG SANSKLIQRL DGSTVSVALV GTPIYTEGVI SGAVLVLHDM
TQEQQYIADL SWQAAHDPLT GLVNRSEFER RLQRVLDEDC GQGRSHCLMF LDLDQFKLVN
DTGGHAAGDE LLRQLCRALP QGLRDGDTLA RLGGDEFGVL LVDCPAETAL DMAEALREVV
QRLHFMWKGR PFMTTVSIGL VHLGDTPASL EGSLSAADMA CYMAKERGRN RVQAYSVDDL
TLSMRFGEMA WIQRLHMAMD ENRFCLYAQE IASIKGEVGE VRHIEILLRL RDESGRMVVP
DNFIPAAERY GLMTTLDRWV VHNVFKVIAQ CQSDDRHQVP QALCAINLSG SSIGDDTFLE
YLKQQFKTFD VSPGMICFEI TETSAIADLQ SAIRFINELK ALGCQFSLDD FCSGMSSFAY
LKHLPVDFLK IDGSFVKDML DNPINKAMVE VINNIGHVMG KRTIAEYVET PQIESALQEM
GVDFAQGYLI SRPELFTCES LYIQPVRPDP LMFGAPGTLR
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