Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3633 |
Symbol | |
ID | 3369168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4314017 |
End bp | 4315294 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637653992 |
Product | threonine/serine transporter |
Protein accession | YP_236703 |
Protein GI | 66046862 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.04757 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGATC AGGCTAATGG CGTCGTAGAA CGTCTGGATG TAGCTCCCGA GAGCATCGCG TCATGGAATC GTAATGACAC CACCTGGATG CTCGGATTGT TCGGTACCGC CATCGGTGCG GGTACCCTGT TTTTGCCAAT CAACGCGGGT ATCGGTGGTT TCTGGCCATT GATGGCGCTG GCACTGCTGG CGTTTCCCAT GACCTTCTAC GCCCACCGTG GGTTGACGCG CTTCGTGCTC TCAGGACGTG AAGGTGCCGA CATCACCGAT GTGGTCGAAG AGCATTTCGG CAAGAGTGCC GGTGCGATGA TCACCTTGCT GTATTTCTTC GCAATTTTCC CGATCCTGCT GATCTACAGC GTGGCCCTCA CCAACACCGT CGGCAGTTTT CTTGAGCACC AGTTGCACAT CACGCCACCG CCGCGCGCCG CACTGGCGTT TGTGCTGATC ATGGGGCTGC TGGCCGTGGT GCGTTGTGGC GAGCGGTTCA TCGTCAAGGC CATGAGCCTG ATGGTTTATC CGTTCATCGT CGCACTATTG TTTCTGGCAA TATTCCTCAT CCCGCACTGG ACCGGCGGCA TTCTGAGCAC CGCTACCACG TTCCCTGAGC TATCGGCGTT CATACCCACG TTGTGGCTGG CCATTCCGGT GATGGTGTTC TCTTTCAACC ACACACCGAT CATCTCGGCC TTTGCCGTCG ATCAGAAGCG TCAGTATGGC GAAAACGCCG AGGTGCGCAG TTCGCAGATT CTGGCCCGCG CCCACGGTCT GATGGTCGTG ATGGTGCTGT TCTTCGTGTT CAGTTGCGTG TTGACCCTGT CGCCTGCCCA ACTGGCCGAG GCCAAGGCGC AGAACATCTC GATCCTGTCT TACCTGGCCA ACCACTTCAA CAACCCGACC ATCGCCTTTG TCGCGCCACT GATCGCGTTC GTGGCTATTT CCAAGTCGTT TCTTGGCCAC TACATCGGTG CGAGCGAGGG CTTGAAAGGC CTGGTTCTGA AGGCGGGTCG TCGTCCTGCA CCCAAGGCCC TGGACCGCAT GACCGCGGCG TTCATGCTGG TGGTGTGCTG GCTGGTGGCA ACGCTCAACC CGAGCATCCT GGGCATGATC GAAACCCTGG GCGGGCCGGT GATTTCGGCT TTGCTGTTCC TGATGCCGAT GTACGCCATC CACAAAGTAC CAGCCATGCG TAAATACGCT GGCGCGTGGT CCAACTACTT TGTGGTGGCC GCCGGTGTGG TGGCAATTTC AGCATTGATC TTTTCGCTGA TCCGCTGA
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Protein sequence | MNDQANGVVE RLDVAPESIA SWNRNDTTWM LGLFGTAIGA GTLFLPINAG IGGFWPLMAL ALLAFPMTFY AHRGLTRFVL SGREGADITD VVEEHFGKSA GAMITLLYFF AIFPILLIYS VALTNTVGSF LEHQLHITPP PRAALAFVLI MGLLAVVRCG ERFIVKAMSL MVYPFIVALL FLAIFLIPHW TGGILSTATT FPELSAFIPT LWLAIPVMVF SFNHTPIISA FAVDQKRQYG ENAEVRSSQI LARAHGLMVV MVLFFVFSCV LTLSPAQLAE AKAQNISILS YLANHFNNPT IAFVAPLIAF VAISKSFLGH YIGASEGLKG LVLKAGRRPA PKALDRMTAA FMLVVCWLVA TLNPSILGMI ETLGGPVISA LLFLMPMYAI HKVPAMRKYA GAWSNYFVVA AGVVAISALI FSLIR
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