Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3624 |
Symbol | |
ID | 3369159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4307764 |
End bp | 4308654 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637653983 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_236694 |
Protein GI | 66046853 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00214713 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.293437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGTTA TGCCTTCCAT CTGGGAGTTT GATGTATTGG CCACCTACCC GAGCATTGAT ACCGAACTGT TGCGCACCTT CGTGGCGATT GCCGATCACG GCGGTTTCAC TCGCGCAGGT GAAGCGGTCA ACCGCACACA GTCGGCGGTC AGCATGCAGA TGAAGCGTCT GGAAGAAGAC GTCGTGCAGC GCCCGCTGTT TCAGCGTGAA GGCCGGGTCC TGAACCTGAC TGCGGAGGGC CAGGTACTGC TCGGTTACGC GCGGCGAATT CTCAAGCTGC ACAGCGAGGT GTTCAACACC TTGCGCGAGC CGCACATGAT CGGCGTGGTG AAAATCGGCT CGCCGGACGA TTACGTGATG CGCTTCCTGC CCGGCATTCT GGCGCAGTTC GCCCAGGCCT ATCCGCTGGT TCAAGTGGAA GTGCATTGCG AGCCATCGGA CCTTCTGCTG CAACGTCACG ACCTGGATCT GACCATTGTC ACGCGCAAGC CCGGCACCGA GATCGGCACG CTGCTGCGTC AGGAACGTCT GATGTGGATG GAGGCCGTCG GCTTTGCCCC GCATGAGCAA ACACCCATTC CGCTGGCGAT GTTCAATACC CACTGTTTCT GTCGTGACTG GGCGTGCAAT GCGCTGGACG GCATGGGGCG CGATTACCGC ATCGCCTACA GCAGCTCGAG CATGGCGGCG ATCACTGCGG TGGTCAGCGC GGGCCTGGCA GTCACCGCGC AGTTCCAGAG CCTGGCCACA GCGGATTTGC GTATCCTCGG CGAGGCGGAA CAATTTCCAC AGCTGCCAAC CGCCAGCATC GTCCTCCTGC GCAAGCCTGA AAATCCCTCG CCCATCACCG AATGCATGGC CGATTACATC ATCGCCGGCT TCAAACCTTG A
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Protein sequence | MFVMPSIWEF DVLATYPSID TELLRTFVAI ADHGGFTRAG EAVNRTQSAV SMQMKRLEED VVQRPLFQRE GRVLNLTAEG QVLLGYARRI LKLHSEVFNT LREPHMIGVV KIGSPDDYVM RFLPGILAQF AQAYPLVQVE VHCEPSDLLL QRHDLDLTIV TRKPGTEIGT LLRQERLMWM EAVGFAPHEQ TPIPLAMFNT HCFCRDWACN ALDGMGRDYR IAYSSSSMAA ITAVVSAGLA VTAQFQSLAT ADLRILGEAE QFPQLPTASI VLLRKPENPS PITECMADYI IAGFKP
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