Gene Psyr_3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3624 
Symbol 
ID3369159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4307764 
End bp4308654 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content60% 
IMG OID637653983 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_236694 
Protein GI66046853 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00214713 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.293437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTTA TGCCTTCCAT CTGGGAGTTT GATGTATTGG CCACCTACCC GAGCATTGAT 
ACCGAACTGT TGCGCACCTT CGTGGCGATT GCCGATCACG GCGGTTTCAC TCGCGCAGGT
GAAGCGGTCA ACCGCACACA GTCGGCGGTC AGCATGCAGA TGAAGCGTCT GGAAGAAGAC
GTCGTGCAGC GCCCGCTGTT TCAGCGTGAA GGCCGGGTCC TGAACCTGAC TGCGGAGGGC
CAGGTACTGC TCGGTTACGC GCGGCGAATT CTCAAGCTGC ACAGCGAGGT GTTCAACACC
TTGCGCGAGC CGCACATGAT CGGCGTGGTG AAAATCGGCT CGCCGGACGA TTACGTGATG
CGCTTCCTGC CCGGCATTCT GGCGCAGTTC GCCCAGGCCT ATCCGCTGGT TCAAGTGGAA
GTGCATTGCG AGCCATCGGA CCTTCTGCTG CAACGTCACG ACCTGGATCT GACCATTGTC
ACGCGCAAGC CCGGCACCGA GATCGGCACG CTGCTGCGTC AGGAACGTCT GATGTGGATG
GAGGCCGTCG GCTTTGCCCC GCATGAGCAA ACACCCATTC CGCTGGCGAT GTTCAATACC
CACTGTTTCT GTCGTGACTG GGCGTGCAAT GCGCTGGACG GCATGGGGCG CGATTACCGC
ATCGCCTACA GCAGCTCGAG CATGGCGGCG ATCACTGCGG TGGTCAGCGC GGGCCTGGCA
GTCACCGCGC AGTTCCAGAG CCTGGCCACA GCGGATTTGC GTATCCTCGG CGAGGCGGAA
CAATTTCCAC AGCTGCCAAC CGCCAGCATC GTCCTCCTGC GCAAGCCTGA AAATCCCTCG
CCCATCACCG AATGCATGGC CGATTACATC ATCGCCGGCT TCAAACCTTG A
 
Protein sequence
MFVMPSIWEF DVLATYPSID TELLRTFVAI ADHGGFTRAG EAVNRTQSAV SMQMKRLEED 
VVQRPLFQRE GRVLNLTAEG QVLLGYARRI LKLHSEVFNT LREPHMIGVV KIGSPDDYVM
RFLPGILAQF AQAYPLVQVE VHCEPSDLLL QRHDLDLTIV TRKPGTEIGT LLRQERLMWM
EAVGFAPHEQ TPIPLAMFNT HCFCRDWACN ALDGMGRDYR IAYSSSSMAA ITAVVSAGLA
VTAQFQSLAT ADLRILGEAE QFPQLPTASI VLLRKPENPS PITECMADYI IAGFKP