Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3600 |
Symbol | |
ID | 3369131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4281346 |
End bp | 4282314 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653955 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_236670 |
Protein GI | 66046829 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0326456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.336549 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG GCTGGTACTA TGCTTTTTGC CTATGTTTAA TCTCTTTTTT ATGTGCGGTC CGAATGAAAA TTGATGATAT CGATGCGTTC GTTGCAGTCA TCCGCTGCCA GTCGATCAGC CACGCCGCTG AATCGCTGGA TCTGACCCAG CCAGCCATCA CGCGGCGGGT GCAGAATTTC GAGCAAGCCC TCGGAGTCGA GCTGTTCGAC CGCAATACCA AGCCGCTCAA GCCGACTCCG ATGGGGCTTC AGGTGTACCA GAAGTGCCTG GCGATCCTGC GCGAGATGGA TTCGTTGCGC GAGCTGGTGG CCAGTGACAC GCCGCCCAGC GGTCTGTTGC GTCTGGGCGT GCCGCAAACC ATCGGTGACG TGGTGCTGCT CGATGCGCTC AAGCAATTGC GTGGGGGATT TCCGGATCTG CGCGCCCAGG TCAGCACCGG TTGGGGCAGT CATCTGATCG GCAAGATCGA AAACGGCGAG CTGGATGCGG CGGCTGCGCT GTTTCCGGCG GGCAAGATAT TTCCGGACAA CATCATCGGT CAGTCGATTG GCAAGATGGA GCTGGTGGTG GTCTGCGCCA GGGGGCTGGC TCCGAAAAAG CCCGGCAAGC TGGCGGACTG TTATGAGCAG GGCTGGGTGC TTAATCCGGA CGGCTGCGGT TTTCGTGCAG GCTTGCAGCG CACGCTGACC GATCAGGGCT TGAGCATGAA GGTCAATCTG GAAACTTTCG GCACCGAGCT GCAACTCGGG CTGGTGGCCG ACGGCATGGG GCTTGGCCTG GTGCCCCGTC CGCTGCTGGA ACGCAGCGCG CACCGCGAGC AGTTGGTGGC GTTGCCGCTC AAGGACTTCA AACCGGTGAT GGACTTGTGG CTGTTCTACC CGCGCTTCCT GGGTAACCTG CAAGCGCCGG TCGAAGCCTT TGGCGCACTG GTGGCCCGGT CGCTCAAGCC GGTCTCGGCC GCCGCCTGA
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Protein sequence | MSAGWYYAFC LCLISFLCAV RMKIDDIDAF VAVIRCQSIS HAAESLDLTQ PAITRRVQNF EQALGVELFD RNTKPLKPTP MGLQVYQKCL AILREMDSLR ELVASDTPPS GLLRLGVPQT IGDVVLLDAL KQLRGGFPDL RAQVSTGWGS HLIGKIENGE LDAAAALFPA GKIFPDNIIG QSIGKMELVV VCARGLAPKK PGKLADCYEQ GWVLNPDGCG FRAGLQRTLT DQGLSMKVNL ETFGTELQLG LVADGMGLGL VPRPLLERSA HREQLVALPL KDFKPVMDLW LFYPRFLGNL QAPVEAFGAL VARSLKPVSA AA
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