Gene Psyr_3600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3600 
Symbol 
ID3369131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4281346 
End bp4282314 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content61% 
IMG OID637653955 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_236670 
Protein GI66046829 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0326456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.336549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG GCTGGTACTA TGCTTTTTGC CTATGTTTAA TCTCTTTTTT ATGTGCGGTC 
CGAATGAAAA TTGATGATAT CGATGCGTTC GTTGCAGTCA TCCGCTGCCA GTCGATCAGC
CACGCCGCTG AATCGCTGGA TCTGACCCAG CCAGCCATCA CGCGGCGGGT GCAGAATTTC
GAGCAAGCCC TCGGAGTCGA GCTGTTCGAC CGCAATACCA AGCCGCTCAA GCCGACTCCG
ATGGGGCTTC AGGTGTACCA GAAGTGCCTG GCGATCCTGC GCGAGATGGA TTCGTTGCGC
GAGCTGGTGG CCAGTGACAC GCCGCCCAGC GGTCTGTTGC GTCTGGGCGT GCCGCAAACC
ATCGGTGACG TGGTGCTGCT CGATGCGCTC AAGCAATTGC GTGGGGGATT TCCGGATCTG
CGCGCCCAGG TCAGCACCGG TTGGGGCAGT CATCTGATCG GCAAGATCGA AAACGGCGAG
CTGGATGCGG CGGCTGCGCT GTTTCCGGCG GGCAAGATAT TTCCGGACAA CATCATCGGT
CAGTCGATTG GCAAGATGGA GCTGGTGGTG GTCTGCGCCA GGGGGCTGGC TCCGAAAAAG
CCCGGCAAGC TGGCGGACTG TTATGAGCAG GGCTGGGTGC TTAATCCGGA CGGCTGCGGT
TTTCGTGCAG GCTTGCAGCG CACGCTGACC GATCAGGGCT TGAGCATGAA GGTCAATCTG
GAAACTTTCG GCACCGAGCT GCAACTCGGG CTGGTGGCCG ACGGCATGGG GCTTGGCCTG
GTGCCCCGTC CGCTGCTGGA ACGCAGCGCG CACCGCGAGC AGTTGGTGGC GTTGCCGCTC
AAGGACTTCA AACCGGTGAT GGACTTGTGG CTGTTCTACC CGCGCTTCCT GGGTAACCTG
CAAGCGCCGG TCGAAGCCTT TGGCGCACTG GTGGCCCGGT CGCTCAAGCC GGTCTCGGCC
GCCGCCTGA
 
Protein sequence
MSAGWYYAFC LCLISFLCAV RMKIDDIDAF VAVIRCQSIS HAAESLDLTQ PAITRRVQNF 
EQALGVELFD RNTKPLKPTP MGLQVYQKCL AILREMDSLR ELVASDTPPS GLLRLGVPQT
IGDVVLLDAL KQLRGGFPDL RAQVSTGWGS HLIGKIENGE LDAAAALFPA GKIFPDNIIG
QSIGKMELVV VCARGLAPKK PGKLADCYEQ GWVLNPDGCG FRAGLQRTLT DQGLSMKVNL
ETFGTELQLG LVADGMGLGL VPRPLLERSA HREQLVALPL KDFKPVMDLW LFYPRFLGNL
QAPVEAFGAL VARSLKPVSA AA