Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3555 |
Symbol | |
ID | 3369086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4233778 |
End bp | 4235010 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637653910 |
Product | aspartate kinase |
Protein accession | YP_236625 |
Protein GI | 66046784 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00961214 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.594079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTAA TCGTACAGAA ATTTGGCGGC ACCTCCGTGG GCTCTGTAGA GCGCATCGAG CAGGTGGCCG ACAAGGTCAA GAAATTCCGT GAGGCGGGTG ACGACCTGGT GGTCGTGCTG TCGGCCATGA GCGGTGAAAC CAATCGTCTG ATCGAGCTGG CCAGGCAGAT CAGTGATCAG CCGGTTCCCC GTGAGCTGGA TGTCATTGTC TCCACGGGCG AGCAGGTGAC CATCGCGCTG CTGGCGATGG CCTTGATGAA GCGTGGCGTT CCGGCGGTGT CCTACACCGG CAATCAGGTG CGTATTCTCA CCGACAGCGC GCACAACAAG GCGCGCATTC TGCAGATCGA CGACCAGAAG ATCCGCTCCG ACCTGAAAGC GGGTCGTGTG GTGGTGGTCG CCGGTTTCCA GGGTGTCGAC GAACACGGCA ATATCACCAC CCTCGGCCGT GGTGGCTCGG ACACGACCGG TGTTGCCCTG GCGGCGGCGC TGAAAGCGGA CGAGTGCCAG ATCTACACCG ACGTCGATGG CGTCTACACC ACCGATCCGC GTGTCGTGTC GCAGGCCCAG CGCCTCGACA AGATCACCTT CGAAGAGATG CTGGAAATGG CCAGCCTCGG TTCCAAGGTG CTGCAGATCC GTGCGGTCGA ATTCGCCGGC AAATACAATG TCCCGCTGCG CGTTCTGCAC AGCTTCAAAG AGGGGCCGGG CACCCTTATT ACAATCGATG AAGAGGAATC CATGGAACAG CCGATCATTT CCGGCATCGC CTTCAACCGC GATGAAGCCA AGCTGACCAT CCGTGGTGTG CCAGACACCC CCGGCGTGGC GTTCAAGATT CTCGGCCCGA TCAGCGCGGC CAATATCGAA GTGGACATGA TCGTGCAGAA CGTCTCGCAC GATAACACCA CCGATTTCAC CTTCACGATC CATCGCAACG ATTATCAGGC GGCCTTGCAG GTGCTCGAAG CCACCGCGCG TGAAATCAGC GCGCGTGAAG TGTCCGGCGA TACCAAGATC GCCAAGGTGT CCATCGTCGG CGTCGGCATG CGCTCGCATG CCGGCGTTGC GAGTCGCATG TTCGAAGCGC TGGCCAAGGA GAGCATCAAT ATCCAGATGA TCTCCACATC GGAAATCAAG GTTTCCGTGG TCATCGAAGA GAAATACCTG GAGTTGGCTG TGCGCGCATT GCACACGGCC TTTGAGCTGG ATGCTCCGCG GCAGGGTGAA TGA
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Protein sequence | MALIVQKFGG TSVGSVERIE QVADKVKKFR EAGDDLVVVL SAMSGETNRL IELARQISDQ PVPRELDVIV STGEQVTIAL LAMALMKRGV PAVSYTGNQV RILTDSAHNK ARILQIDDQK IRSDLKAGRV VVVAGFQGVD EHGNITTLGR GGSDTTGVAL AAALKADECQ IYTDVDGVYT TDPRVVSQAQ RLDKITFEEM LEMASLGSKV LQIRAVEFAG KYNVPLRVLH SFKEGPGTLI TIDEEESMEQ PIISGIAFNR DEAKLTIRGV PDTPGVAFKI LGPISAANIE VDMIVQNVSH DNTTDFTFTI HRNDYQAALQ VLEATAREIS AREVSGDTKI AKVSIVGVGM RSHAGVASRM FEALAKESIN IQMISTSEIK VSVVIEEKYL ELAVRALHTA FELDAPRQGE
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