Gene Psyr_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3529 
Symbol 
ID3369056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4205683 
End bp4206414 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID637653880 
ProductAsp/Glu racemase 
Protein accessionYP_236599 
Protein GI66046758 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.323338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTATTC AAGTGATCAA CCCCAATACC AGCGAAGCCA TGACCCACAA GATCGGTCTG 
GCCGCGCAAG CCGTGGCGCG CCCAGGCACA CAGATCATCG CCTGCAGTCC TGCGGATGGC
CCGGTGTCCA TCGAAGGCCA TTTCGATGAG GCGATCGCGA CGCTGGGCGT GCTGGAGGAA
GTGCGCAAGG GGCGCGAACA ACAGGTCGAC GCGCACATCA TCGCCTGTTT CGGCGACCCC
GGCCTGCTGG CGGCACGCGA GTACGCCAGC GCCCCGGTGA TCGGCATCGC CGAAGCGGCC
TTTCATATGG CCAGCCTGAT TTCTACCCGT TTCGCCGTGG TCACGACGCT GACCCGCACG
CGGATCATCG CCGAGCACTT GCTGCAGCGT TATGGCTTCA GTGAGTTATG CACATCGGTG
CGCTGTATCG ATCTGCCGGT GCTGGCGCTG GAGGAAAGCG GGCCGGAGCT CATCGAATGC
ATGGCCGAAC AGGCCCGTCG CGCCCGTGAC GAAGAAGGGG CGGGAGCCAT TGTGCTGGGT
TGCGGCGGGA TGGCGGATCT GGGCAGGCAA CTGAGCGAAG CGATTGGCCT GCCGGTCATC
GACGGCGTGG CAGCGGCGGT GAAACTGGCC GAATCGCTGG TGGATCTGGG CCTGACCACC
AGCAAACACG GCGACCTGGC CGACCCCATC AGCAAACCGT TCAAAGGCCG GTTTGCCTAC
CTGAGTCGGT GA
 
Protein sequence
MRIQVINPNT SEAMTHKIGL AAQAVARPGT QIIACSPADG PVSIEGHFDE AIATLGVLEE 
VRKGREQQVD AHIIACFGDP GLLAAREYAS APVIGIAEAA FHMASLISTR FAVVTTLTRT
RIIAEHLLQR YGFSELCTSV RCIDLPVLAL EESGPELIEC MAEQARRARD EEGAGAIVLG
CGGMADLGRQ LSEAIGLPVI DGVAAAVKLA ESLVDLGLTT SKHGDLADPI SKPFKGRFAY
LSR