Gene Psyr_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3527 
Symbol 
ID3369054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4203866 
End bp4205101 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content60% 
IMG OID637653878 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_236597 
Protein GI66046756 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.129082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.366185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCTT TGACTTACCA CGGCGCGAAC AGTGTAAAAG TCGATACAGT GCCGGACCCT 
GTGATCGAGC AAGCGGATGA CATCATTCTG CGCGTAACGG CGACCGCTAT CTGCGGTTCC
GACCTGCACT TGTATCGCGG CAAAATCCCT ACGGTTGAAC ACGGCGACAT CTTCGGTCAC
GAGTTCATGG GCGTCGTTGA AGAGACCGGC TCGGCCGTCA CGGCTGTAGC CAAAGGCGAT
CGCGTGGTGA TCCCGTTCGT CATCGCCTGC GGCAGCTGCT TTTTCTGCAA CCTCGACCAG
TTCGCGGCCT GCGAAACCAC CAACACCGGA CGTGGCGCGA TTCTCAACAA AAAGTCGATT
CCACCAGGGG CGGCGCTGTT CGGCTTCAGC CATCTGTATG GCGGCGTTCC GGGCGGCCAG
GCTGAATACG TGCGAGTGCC CAAGGCCAAC GTTGGTCCGT TCAAGGTGCC AGGCACACTG
GCTGACGAGA AGGTTCTGTT CCTCTCCGAC ATTCTCCCCA CCGCCTGGCA GGCTGTACTC
AACGCCGGGA TTGGCCAGGG TTCGACGGTT GCCATTTACG GTGCTGGCCC GGTCGGCCTG
ATGAGCGCGG CGTGCGCAAA AATGCTCGGT GCGGAAAAGA TCTTCATGGT CGATCACCAT
CCGTATCGTC TGGCCTATGC GCAGAAAACT TACGGCGTGA TCCCGATCAA TTTCGATGAA
GACGATGATC CGGCTGACAC GATCATTCGC CAGACCGCCG GCATGCGCGG CGTGGATGGC
GTAATCGACG CGGTGGGTTT CGAGGCCAAA GGCAGCACCA CGGAAACCAT TCTGGCAACG
CTGAAGCTGG AAGGCAGCAG CGGCAAGGCA TTGCGTCAGT GCATCGCAGC AGTACGACGC
GGCGGCGTGG TCAGTGTGCC GGGGGTATAT GCCGGGTTCA TCCATGGCTT CATGTTCGGC
GATGCGTTCG ACAAGGGCCT GACCTTCAAA ATGGGCCAGA CCCACGTGCA TCGCTTCATG
CCTGAATTGC TGGAACACAT CGAGGCCGGC CGCCTGGAAC CCGAAGCCAT CATCACGCAC
CGGATGTCAC TGGAAGATGC CGCAAAGGGC TACAAGCTGT TCGACAAGAA GGAAGAGGAT
TGCCGCAAGG TCATCCTGAC GCCTGGCAAC AACACCATTG TGGTGCCGGA CGACACGACC
GAAGCCCTGG TCGGGGGTGG CGTGCCGGCT ATGTAA
 
Protein sequence
MRALTYHGAN SVKVDTVPDP VIEQADDIIL RVTATAICGS DLHLYRGKIP TVEHGDIFGH 
EFMGVVEETG SAVTAVAKGD RVVIPFVIAC GSCFFCNLDQ FAACETTNTG RGAILNKKSI
PPGAALFGFS HLYGGVPGGQ AEYVRVPKAN VGPFKVPGTL ADEKVLFLSD ILPTAWQAVL
NAGIGQGSTV AIYGAGPVGL MSAACAKMLG AEKIFMVDHH PYRLAYAQKT YGVIPINFDE
DDDPADTIIR QTAGMRGVDG VIDAVGFEAK GSTTETILAT LKLEGSSGKA LRQCIAAVRR
GGVVSVPGVY AGFIHGFMFG DAFDKGLTFK MGQTHVHRFM PELLEHIEAG RLEPEAIITH
RMSLEDAAKG YKLFDKKEED CRKVILTPGN NTIVVPDDTT EALVGGGVPA M