Gene Psyr_3522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3522 
Symbol 
ID3369049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4197604 
End bp4198980 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content62% 
IMG OID637653873 
ProductIron-sulfur-dependent L-serine dehydratase single chain form 
Protein accessionYP_236592 
Protein GI66046751 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0540512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA GCGTCTTCGA CATGTTCAAA ATCGGCATCG GGCCGTCCAG TTCCCACACC 
GTCGGGCCAA TGCGCGCCGG TGCGCTGTTC GTGACCGAGC TGCGCGACCA CAACCGGTTG
CACAGCGTAG AACGGATCGA GGTGCGATTG TACGGTTCTC TGTCGGCCAC GGGCATCGGT
CACGGCAGTG ATCGCGCGAC AGTCATGGGC CTGATGGGCG AATGGCCGGA CCAGATCGAC
CCCAGCCAGG TCAACCAGCG TATCGACGCG CTGCGTGCCG ATAACCAGCT GATGCTGGCG
GGCGAACAGG CCATCACCTT CGTCTGGGAG CGAGACATGT GCCTGCTCGA TGAAAGCCTC
CCCTACCATC CCAACGGCAT GACCCTGTGT GCCTACGGCA AGAACGGCGA ACTCCACGAG
CAGACTTATT ATTCGGTGGG CGGCGGTTTC GTAATCGATG CCGAACAGGC CGCCAGCGGC
GTGCTGGACA ACGACACAAC CGTCCTGCCC TATGATTTTT TCAGTGGCGC GCAGTTGCTC
AAGCTGTGCA AGACCCACGG CATGAGCATT TCCGAACTGA TGATGGCCAA TGAAAAGGTC
TGGCGCAGCG AGGAGGAAAT CCGCGAGAAA ATCATGGTGA TCTGGGCCGC AATGCGCGCC
TGCGTCGACA AGGGCCTGTT GGAAACCGGC ATCCTGCCCG GTGGCCTGAA CGTGCGGCGG
CGTGCCTACC GCCTGCATCA GAACCTGCAG AACCTGGATA ACCCCAACGT AATCGGCTCG
ACCCTGAGCG CCATGGAATG GGTCAACCTG TTCGCCCTCG CAGTCAACGA AGAAAACGCC
GCAGGCGGGC GCATGGTGAC CGCGCCCACC AACGGCGCAG CTGGCATCGT GCCCGCCGTG
CTGCATTACT TCATGAAATT CAAGCCCACG GCCAATGACG ATGACGTGGT GCGCTTTTTC
CTGAGCGCCG CTGCGGTCGG CATTCTGTGC AAGAAAAACG CTTCGATTTC CGGTGCCGAG
GTCGGTTGTC AGGGTGAGGT AGGATCGGCC TGCGCAATGG CCGCCGCCGG TCTGGCGGAG
ATCCTCGGCG CGACGCCCGA GCAGGTAGAG AACGCTGCCG AGATTGGCCT GGAGCATAAT
CTGGGGCTGA CCTGCGACCC GGTCGGCGGG CTGGTGCAGA TCCCCTGCAT CGAGCGCAAT
GCGATTGCTG CCGTAAAGGC CATCAATGCC GCCCAGATGG CCCTGCGCGG CGACGGCGAG
CACCACATCT CGCTGGACCA TGCCATCCGC ACCATGCGTG ACACCGGCGC CGACATGCAC
GACAAATACA AGGAAACCTC ACGCGGCGGG CTGGCGGTCA ACCTGATCGA GTGCTGA
 
Protein sequence
MAISVFDMFK IGIGPSSSHT VGPMRAGALF VTELRDHNRL HSVERIEVRL YGSLSATGIG 
HGSDRATVMG LMGEWPDQID PSQVNQRIDA LRADNQLMLA GEQAITFVWE RDMCLLDESL
PYHPNGMTLC AYGKNGELHE QTYYSVGGGF VIDAEQAASG VLDNDTTVLP YDFFSGAQLL
KLCKTHGMSI SELMMANEKV WRSEEEIREK IMVIWAAMRA CVDKGLLETG ILPGGLNVRR
RAYRLHQNLQ NLDNPNVIGS TLSAMEWVNL FALAVNEENA AGGRMVTAPT NGAAGIVPAV
LHYFMKFKPT ANDDDVVRFF LSAAAVGILC KKNASISGAE VGCQGEVGSA CAMAAAGLAE
ILGATPEQVE NAAEIGLEHN LGLTCDPVGG LVQIPCIERN AIAAVKAINA AQMALRGDGE
HHISLDHAIR TMRDTGADMH DKYKETSRGG LAVNLIEC