Gene Psyr_3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3486 
Symbol 
ID3369013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4155735 
End bp4156661 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content54% 
IMG OID637653837 
Productresponse regulator receiver:CheW-like protein 
Protein accessionYP_236556 
Protein GI66046715 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTG TAATGGATTC GGTAAACCAG CGAACTCAGC TGGTGGGTCA GAATCGCCTG 
GAGCTGCTCT TGTTCCGTCT CGACGGCAAG CAGCTCTATG GGATCAACGT CTTCAAGGTA
AAAGAAGTAC TGCAATGCCC GAAACTCACC ATCATGCCCA AATCGAGCAA GATCGTTCGG
GGCGTGGCCA ATATTCGTGG CGGCACGATC CCGATCATGG ATCTGGCAAT GGCGACAGGT
TCCACAGGGA TGATTTCGCT GGTTAATTCC TTCGTCATCA TTACCGAGTA CAACACCAAG
GTTCAGGGCT TTCTGGTGCA TTCTGTCGAA CGCATCGTCA ACATGAACTG GGAAGAGATT
CATCCACCAC CCAAGGGCAC CGGGCGCGAT CATTACCTGA CCGCCGTTAC CCGGGTTGAT
AACCAGCTGG TGGAAATCAT CGACGTCGAG AAAATTCTCG CCGAAGTCGC GCCAGTGTCC
GAAGAAATCT CGGTCGGTGT CATTGACGCC GAGGTTCAGC ACAAGGCTGT CTCCCTGCGT
GTGCTGACGG TCGACGACTC GTCGGTGGCC CGTAAGCAGG TGAGCCGCTG CCTGGAAACC
GTCGGGGTGG AAGTCGTAGC GCTCAACGAT GGTCGTCAGG CGCTGGATTA CCTGCTCAAG
ATGGTCGCAG AAGGCAAAAA ACCTGAAGAA GAGTTCCTGA TGATGATCTC CGACATTGAA
ATGCCGGAGA TGGATGGCTA TACCCTTACC GCAGCAATAC GCAATGATCC ACGCATGCAG
AAGATGCACA TCACTTTGCA TACCTCGCTG TCAGGGGTAT TCAACCAGGC GATGGTCAAG
AAAGTTGGCG CGGATGATTT TCTCGCGAAA TTCAGGCCTG ATGATCTGGC GGCCAGGGTC
GTTGCGCGGA TCAAGGCAGC AGAATAA
 
Protein sequence
MAGVMDSVNQ RTQLVGQNRL ELLLFRLDGK QLYGINVFKV KEVLQCPKLT IMPKSSKIVR 
GVANIRGGTI PIMDLAMATG STGMISLVNS FVIITEYNTK VQGFLVHSVE RIVNMNWEEI
HPPPKGTGRD HYLTAVTRVD NQLVEIIDVE KILAEVAPVS EEISVGVIDA EVQHKAVSLR
VLTVDDSSVA RKQVSRCLET VGVEVVALND GRQALDYLLK MVAEGKKPEE EFLMMISDIE
MPEMDGYTLT AAIRNDPRMQ KMHITLHTSL SGVFNQAMVK KVGADDFLAK FRPDDLAARV
VARIKAAE