Gene Psyr_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3455 
SymbolfliH 
ID3368982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4118235 
End bp4119053 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content58% 
IMG OID637653806 
Productflagellar assembly protein H 
Protein accessionYP_236525 
Protein GI66046684 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGTT CCAATAAAGA ATCGGCCAGC GACCTCATTC GCGCCAAGGA CGCCGCGTTG 
CTCGACATCT GGGCGCTGCC CAGCTTCGAT CCACACGTGG AGCCCGAACC TGAACCGGAA
CCCGAGCTGG TCGACGAACC GGCCGAGATG GAAGAAGTGC CGCTGGATGA AGTTCAGCCA
CTGACTCTGG AAGAGCTGGA AAGCATCCGC CAGGAGGCCT GGAACGAAGG CTTCGCCACC
GGTGAAAAGG AAGGTTTTCA CAGCACTCAG CTAAAAGTGC GTCAGGAGGC GGAGGTCGTT
CTTGCGGCAA AAGTTGCCAG CCTGGAACAA CTGATGGGTA ATCTGCTGGC ACCTATCGCC
GAGCAGGACA CCCAGATCGA AAAGGCCGTC ATTTACCTCG TCGAGCACAT CGCGCGTAAG
GTCATTCAGC GCGAGCTGGT CACGGACTCG GCACAGATTG CCAGCGTGCT GCGCGATGCC
CTCAAGCTAT TGCCGATGGG CGCGCAGAAT GTGCGAATTT TCATAAACCC TCAGGACTTC
CTGCTGGTCA AGGCCATGCG TGAGCGTCAC GAGGAGTCGT GGAAGATCGT CGAAGACGAA
GACCTGCTGC CGGGCGGTTG CCGGATCGAA ACCGAGCATA GCCGTATCGA CGCCAGCGTC
GAAACACGCA TTGCCCTGGC GATTTCCAAG ATGCACGACC AGTTGCATGA ACAGGTCACT
CATCCTGCTG CAGCGGATCT GAGCGTTGAT CTGGATGTTT CGCCAGGCAA AGCCTCCAAT
GCTGAAGAAT CTGACGCGGA CACCCTCGAT GCGCCTTGA
 
Protein sequence
MSSSNKESAS DLIRAKDAAL LDIWALPSFD PHVEPEPEPE PELVDEPAEM EEVPLDEVQP 
LTLEELESIR QEAWNEGFAT GEKEGFHSTQ LKVRQEAEVV LAAKVASLEQ LMGNLLAPIA
EQDTQIEKAV IYLVEHIARK VIQRELVTDS AQIASVLRDA LKLLPMGAQN VRIFINPQDF
LLVKAMRERH EESWKIVEDE DLLPGGCRIE TEHSRIDASV ETRIALAISK MHDQLHEQVT
HPAAADLSVD LDVSPGKASN AEESDADTLD AP