Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3455 |
Symbol | fliH |
ID | 3368982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4118235 |
End bp | 4119053 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637653806 |
Product | flagellar assembly protein H |
Protein accession | YP_236525 |
Protein GI | 66046684 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAGTT CCAATAAAGA ATCGGCCAGC GACCTCATTC GCGCCAAGGA CGCCGCGTTG CTCGACATCT GGGCGCTGCC CAGCTTCGAT CCACACGTGG AGCCCGAACC TGAACCGGAA CCCGAGCTGG TCGACGAACC GGCCGAGATG GAAGAAGTGC CGCTGGATGA AGTTCAGCCA CTGACTCTGG AAGAGCTGGA AAGCATCCGC CAGGAGGCCT GGAACGAAGG CTTCGCCACC GGTGAAAAGG AAGGTTTTCA CAGCACTCAG CTAAAAGTGC GTCAGGAGGC GGAGGTCGTT CTTGCGGCAA AAGTTGCCAG CCTGGAACAA CTGATGGGTA ATCTGCTGGC ACCTATCGCC GAGCAGGACA CCCAGATCGA AAAGGCCGTC ATTTACCTCG TCGAGCACAT CGCGCGTAAG GTCATTCAGC GCGAGCTGGT CACGGACTCG GCACAGATTG CCAGCGTGCT GCGCGATGCC CTCAAGCTAT TGCCGATGGG CGCGCAGAAT GTGCGAATTT TCATAAACCC TCAGGACTTC CTGCTGGTCA AGGCCATGCG TGAGCGTCAC GAGGAGTCGT GGAAGATCGT CGAAGACGAA GACCTGCTGC CGGGCGGTTG CCGGATCGAA ACCGAGCATA GCCGTATCGA CGCCAGCGTC GAAACACGCA TTGCCCTGGC GATTTCCAAG ATGCACGACC AGTTGCATGA ACAGGTCACT CATCCTGCTG CAGCGGATCT GAGCGTTGAT CTGGATGTTT CGCCAGGCAA AGCCTCCAAT GCTGAAGAAT CTGACGCGGA CACCCTCGAT GCGCCTTGA
|
Protein sequence | MSSSNKESAS DLIRAKDAAL LDIWALPSFD PHVEPEPEPE PELVDEPAEM EEVPLDEVQP LTLEELESIR QEAWNEGFAT GEKEGFHSTQ LKVRQEAEVV LAAKVASLEQ LMGNLLAPIA EQDTQIEKAV IYLVEHIARK VIQRELVTDS AQIASVLRDA LKLLPMGAQN VRIFINPQDF LLVKAMRERH EESWKIVEDE DLLPGGCRIE TEHSRIDASV ETRIALAISK MHDQLHEQVT HPAAADLSVD LDVSPGKASN AEESDADTLD AP
|
| |