Gene Psyr_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3452 
Symbol 
ID3368979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4115999 
End bp4116346 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content54% 
IMG OID637653803 
ProductSulfate transporter/antisigma-factor antagonist STAS 
Protein accessionYP_236522 
Protein GI66046681 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.466044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCA CTTCCGAACG TTCTGCCGAT GGCCAGACGC TGACCCTTTA TATCGAAGGG 
CGTTTCGATT TCAATTCCCA TCAGGCGTTT CGCACTGCCT ATGAGGACTA TCCGCAGTCG
CTGAACTACG TGGTCGACCT GCGCGGTACG CATTATCTGG ACAGTTCTGC GCTGGGCATG
CTGTTGCTGC TGCGCGATCA CGCCGGAGGT GACAAGGCAT TGGTACGCCT GGTCAACTGC
ACGCCTGATG TGCTGAAGAT TCTGGCCATT TCCAATTTCT CGAAGCTGTT CGAATTGAGC
ATACCCAGTG CAGCCAGCCC CGAACAAACT GTGCATTCTG ATCGCTGA
 
Protein sequence
MTVTSERSAD GQTLTLYIEG RFDFNSHQAF RTAYEDYPQS LNYVVDLRGT HYLDSSALGM 
LLLLRDHAGG DKALVRLVNC TPDVLKILAI SNFSKLFELS IPSAASPEQT VHSDR