Gene Psyr_3422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3422 
Symbol 
ID3368949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4086605 
End bp4087354 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content66% 
IMG OID637653773 
Producthypothetical protein 
Protein accessionYP_236492 
Protein GI66046651 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.6315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0560665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCC GCCTGTGGAA CATGTCCCGC CTGAGCCTCC CCAGTCGGGC GCGGACGAGA 
AACGCGATGT TTGAACTTGC TTCGATGCTG TTCTCGGCAT TCATTCTCGG GCTGCTGGGC
GGTGGTCACT GCCTGGGTAT GTGTGGCGGC CTGATGGGTG CCCTGACGCT GGCCATCCCC
AAAGAACAGC GCAGCCGCCG GTTTCGTCTG CTGCTGGCCT ACAACCTGGG CCGCATTCTC
AGCTACGGCG TTGCCGGCGT GTGTTCCGGA CTGGTCGGCT GGGCGGTCGC GCAAAGTCCG
CTGGCGACAG GCCTGCGCAT CGTCGCCGCC GTGTTGCTGA TCATGATGGG GTTGTACCTG
GCCGGCTGGT GGAGCGGACT GACCTATATA GAACGCCTTG GCCGAGGCCT GTGGCGTTAT
TTGCAACCCC TGGCCAGTCG CCTGTTGCCG GTGTCCAGTG TGCCGCGCGC CTTGTTGCTC
GGCGCCCTGT GGGGCTGGCT GCCCTGCGGG CTGGTCTACA GCGCCCTGCT GTGGGCCGCC
AGCCAGGGCA ATCCTCTCGA CAGCGCGCTG CTGATGCTGG CCTTCGGGCT GGGCACCTGG
CCCGTGCTGC TGGCCACCGG CCTGGCTGCC GAACGCACCA CGGCCTTGCT GCGCAAACGT
GGTGTGCGCA TGGCGGGAGG GCTGCTGGTG ATAGTCTTCG GTATCTGGAC CTTGCCAGGC
CCGCATCAGC ATTGGCTGAT GGGGCATTGA
 
Protein sequence
MTRRLWNMSR LSLPSRARTR NAMFELASML FSAFILGLLG GGHCLGMCGG LMGALTLAIP 
KEQRSRRFRL LLAYNLGRIL SYGVAGVCSG LVGWAVAQSP LATGLRIVAA VLLIMMGLYL
AGWWSGLTYI ERLGRGLWRY LQPLASRLLP VSSVPRALLL GALWGWLPCG LVYSALLWAA
SQGNPLDSAL LMLAFGLGTW PVLLATGLAA ERTTALLRKR GVRMAGGLLV IVFGIWTLPG
PHQHWLMGH